RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 VIMP08670 466 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 TNNC1P63316 161 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 WLSQ5T9L3 541 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PAPD7Q5XG87 772 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 NBPF5PQ86XG9 351 aaPredicted RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 LMNTD2Q8IXW0 634 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 NSMCE1Q8WV22 266 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 GSDMAQ96QA5 445 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 TRIM10Q9UDY6 481 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 A0A0G2JS52 829 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 SKOR1P84550 965 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 GRIPAP1Q4V328 841 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PSMB7Q99436 277 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 NOP53Q9NZM5 478 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 CORO1CQ9ULV4 474 aaPredicted RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 MAP3K19Q56UN5 1328 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 LGALS16A8MUM7 142 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 BMP6P22004 513 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PTPREP23469 700 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 GBP1P32455 592 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PRPHP41219 470 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ZNF174Q15697 407 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 NSRP1Q9H0G5 558 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 PLAAQ9Y263 795 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ITSN2Q9NZM3 1697 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ACTN4O43707 911 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 TRIM68Q6AZZ1 485 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 RETREG2Q8NC44 543 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 CCHCR1Q8TD31 782 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 HOOK2Q96ED9 719 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 TRIM47Q96LD4 638 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 RNPC3Q96LT9 517 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 FGFR1OPO95684 399 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 PROSER3Q2NL68 480 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 CCDC178Q5BJE1 867 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 MPRIPQ6WCQ1 1025 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 FAM43BQ6ZT52 329 aaPredicted RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 CCDC82Q8N4S0 544 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 SPATA4Q8NEY3 305 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 CRB1P82279 1406 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ZNF213O14771 459 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PPP1R37O75864 691 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PEX19P40855 299 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 CYB5D1Q6P9G0 228 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 HOOK3Q86VS8 718 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 DBNDD2Q9BQY9 259 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 LRRC1Q9BTT6 524 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 BATF3Q9NR55 127 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 MAST1Q9Y2H9 1570 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 GJB4Q9NTQ9 266 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 HYOU1Q9Y4L1 999 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 SH3TC1Q8TE82 1336 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 PTPAQ15257 358 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 C2CD5Q86YS7 1000 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 RASSF10A6NK89 507 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 TCP1P17987 556 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 AMOTQ4VCS5 1084 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 TCP11X2Q5H9J9 407 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 TYW1BQ6NUM6 668 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ARMC9Q7Z3E5 817 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 STAMBPL1Q96FJ0 436 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 MYD88Q99836 296 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 STMN4Q9H169 189 aaPredicted RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 COPRSQ9NQ92 184 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ZNF233A6NK53 670 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 STXBP3O00186 592 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 ZNF185O15231 689 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 MYCBPAPQ8TBZ2 947 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 FERMT2Q96AC1 680 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 GBP5Q96PP8 586 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 HPS5Q9UPZ3 1129 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 CFAP73A6NFT4 308 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 PSMD2Q13200 908 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 MTMR3Q13615 1198 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 RRP36Q96EU6 259 aaKnown RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 HPSEQ9Y251 543 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 MED23Q9ULK4 1368 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 A0A0U1RQJ8 604 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 C8orf74Q6P047 294 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 LRIG3Q6UXM1 1119 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 ZNF473Q8WTR7 871 aaKnown RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 COL3A1P02461 1466 aaPredicted RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 IFIT1P09914 478 aaKnown RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 MDM2Q00987 491 aaPredicted RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 KRT71Q3SY84 523 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 BLZF1Q9H2G9 400 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 KCNJ14Q9UNX9 436 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 GTPBP6O43824 516 aaPredicted RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 UBLCP1Q8WVY7 318 aaPredicted RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 NOD2Q9HC29 1040 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.57□□□□□ -1.52
HERC1-201ENST00000443617 NCKAP5LQ9HCH0 1330 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 KDRP35968 1356 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 TRIM37O94972 964 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 SEC24CP53992 1094 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 GCKRQ14397 625 aa5.57□□□□□ -1.52
HERC1-201ENST00000443617 ANKRD20A8PQ5CZ79 823 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms