RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 VCPKMTQ9H867 229 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
HDAC6-211ENST00000443563 CYP2C8P10632 490 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 VCAM1P19320 739 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 PTH1RQ03431 593 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 TRDNQ13061 729 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 SIAH1Q8IUQ4 282 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 CEP95Q96GE4 821 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 KRT23Q9C075 422 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 ADGRA2Q96PE1 1338 aa12.8□□□□□ -0.36
HDAC6-211ENST00000443563 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
HDAC6-211ENST00000443563 DGKZQ13574 1117 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 CATSPERGQ6ZRH7 1159 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 CTU1Q7Z7A3 348 aaKnown RBP12.79□□□□□ -0.36
HDAC6-211ENST00000443563 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 RPAP3Q9H6T3 665 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-211ENST00000443563 ANO2Q9NQ90 1003 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 TCP11L1Q9NUJ3 509 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 CPA4Q9UI42 421 aa12.79□□□□□ -0.36
HDAC6-211ENST00000443563 MGAMO43451 1857 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 F5H6K3 240 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 RAD21O60216 631 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 GNRH1P01148 92 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 BCRP11274 1271 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 HERVK_113P62684 666 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 KLRC3Q07444 240 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
HDAC6-211ENST00000443563 FAM110CQ1W6H9 321 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 TTC14Q96N46 770 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 TANGO6Q9C0B7 1094 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 LSG1Q9H089 658 aaKnown RBP12.78□□□□□ -0.36
HDAC6-211ENST00000443563 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
HDAC6-211ENST00000443563 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
HDAC6-211ENST00000443563 CYP21A2P08686 494 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 LACTBP83111 547 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-211ENST00000443563 COG2Q14746 738 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 COL13A1Q5TAT6 717 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-211ENST00000443563 RNF20Q5VTR2 975 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 RALYLQ86SE5 291 aaKnown RBP12.77□□□□□ -0.37
HDAC6-211ENST00000443563 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
HDAC6-211ENST00000443563 EFCC1Q9HA90 598 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 IL17RBQ9NRM6 502 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 TACC3Q9Y6A5 838 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 NEDD4P46934 1319 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 MYPNQ86TC9 1320 aa12.77□□□□□ -0.37
HDAC6-211ENST00000443563 PARP14Q460N5 1801 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
HDAC6-211ENST00000443563 KDM4AO75164 1064 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 REC8O95072 547 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 HOXD10P28358 340 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 NOVP48745 357 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
HDAC6-211ENST00000443563 B4E1Z4 1266 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 E7EWF7 191 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 NMT2O60551 498 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 FLOT1O75955 427 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 NDUFB10O96000 172 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 TOP1P11387 765 aaKnown RBP12.75□□□□□ -0.37
HDAC6-211ENST00000443563 PRMT2P55345 433 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 FCGRTP55899 365 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 CCNA1P78396 465 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 DGKHQ86XP1 1220 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
HDAC6-211ENST00000443563 MB21D1Q8N884 522 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 NCOA7Q8NI08 942 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 TRIM17Q9Y577 477 aa12.75□□□□□ -0.37
HDAC6-211ENST00000443563 RLFQ13129 1914 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 A0A0G2JMZ2 1700 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 SPDYE16A6NNV3 312 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-211ENST00000443563 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
HDAC6-211ENST00000443563 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-211ENST00000443563 BMP3P12645 472 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 DSG3P32926 999 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 PSMC4P43686 418 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 ERVK-24P63145 666 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 SART3Q15020 963 aaKnown RBP12.74□□□□□ -0.37
HDAC6-211ENST00000443563 NECTIN1Q15223 517 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 FAM83BQ5T0W9 1011 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 OTOP1Q7RTM1 612 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 CCAR1Q8IX12 1150 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms