RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HAND2P61296 217 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 KIF22Q14807 665 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 PKN2Q16513 984 aaKnown RBP17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 FAM47AQ5JRC9 791 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 CASC1Q6TDU7 716 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 ESYT1Q9BSJ8 1104 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 CPA4Q9UI42 421 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
CSNK1E-210ENST00000442216 WDR46O15213 610 aaKnown RBP17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 RANBP6O60518 1105 aaKnown RBP17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 CDC45O75419 566 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 GNRH1P01148 92 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 LACTBP83111 547 aaPredicted RBP17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 ATP2B2Q01814 1243 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 KIAA1211Q6ZU35 1233 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 MAP4K1Q92918 833 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 INCENPQ9NQS7 918 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 TCP11L1Q9NUJ3 509 aa17.79■□□□□ 0.44
CSNK1E-210ENST00000442216 NOVP48745 357 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 HERVK_113P62684 666 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 PTH1RQ03431 593 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 LBX2Q6XYB7 198 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 TBC1D10CQ8IV04 446 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 CD99L2Q8TCZ2 262 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 ESR2Q92731 530 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 P2RX7Q99572 595 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 RPAP3Q9H6T3 665 aaPredicted RBP17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 TOMM22Q9NS69 142 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 CLIP2Q9UDT6 1046 aa17.78■□□□□ 0.44
CSNK1E-210ENST00000442216 ZSWIM8A7E2V4 1837 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 KIAA1755Q5JYT7 1200 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 TNS4Q8IZW8 715 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 MORF4L1Q9UBU8 362 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 A0A0G2JMZ2 1700 aa17.77■□□□□ 0.44
CSNK1E-210ENST00000442216 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.43
CSNK1E-210ENST00000442216 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 COG2Q14746 738 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 OTOP1Q7RTM1 612 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 ANKRD13CQ8N6S4 541 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 GMCL1P1Q8NEA9 526 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 KRT23Q9C075 422 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 EFCC1Q9HA90 598 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 HOXC10Q9NYD6 342 aa17.76■□□□□ 0.43
CSNK1E-210ENST00000442216 NEDD4P46934 1319 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 F5H6K3 240 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 PRMT2P55345 433 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 KLRC3Q07444 240 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 CCDC178Q5BJE1 867 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 SPICE1Q8N0Z3 855 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 TTC14Q96N46 770 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 TANGO6Q9C0B7 1094 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 MCOLN1Q9GZU1 580 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 RABGAP1Q9Y3P9 1069 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 TRIM17Q9Y577 477 aa17.75■□□□□ 0.43
CSNK1E-210ENST00000442216 CYP21A2P08686 494 aa17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 HOXD10P28358 340 aa17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 PSMC4P43686 418 aa17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 FCGRTP55899 365 aa17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 FBXO46Q6PJ61 603 aaPredicted RBP17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 RBPJLQ9UBG7 517 aa17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 STX8Q9UNK0 236 aa17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 RBM8AQ9Y5S9 174 aaKnown RBP17.74■□□□□ 0.43
CSNK1E-210ENST00000442216 SPDYE16A6NNV3 312 aaPredicted RBP17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 NMT2O60551 498 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 NDUFB10O96000 172 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 DSG3P32926 999 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 CAP1Q01518 475 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 GPRC5AQ8NFJ5 357 aa17.73■□□□□ 0.43
CSNK1E-210ENST00000442216 B4E1Z4 1266 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 KDM4AO75164 1064 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 FLOT1O75955 427 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 ERVK-9P63128 1117 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 ERVK-24P63145 666 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 TRDNQ13061 729 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 GMCL1Q96IK5 515 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 TRIM47Q96LD4 638 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 ARHGAP39Q9C0H5 1083 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 TXNRD2Q9NNW7 524 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 ADAMTS5Q9UNA0 930 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
CSNK1E-210ENST00000442216 RAD21O60216 631 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 CTGFP29279 349 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 CCNA1P78396 465 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 NECTIN1Q15223 517 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms