RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 AKR1B1P15121 316 aa9.36□□□□□ -0.91
CCDC39-201ENST00000442201 MICALL2Q8IY33 904 aa9.36□□□□□ -0.91
CCDC39-201ENST00000442201 CCDC82Q8N4S0 544 aa9.36□□□□□ -0.91
CCDC39-201ENST00000442201 WASF1Q92558 559 aa9.36□□□□□ -0.91
CCDC39-201ENST00000442201 TMEM47Q9BQJ4 181 aa9.36□□□□□ -0.91
CCDC39-201ENST00000442201 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
CCDC39-201ENST00000442201 GEMIN8Q9NWZ8 242 aaKnown RBP9.36□□□□□ -0.91
CCDC39-201ENST00000442201 CNOT7Q9UIV1 285 aaKnown RBP9.36□□□□□ -0.91
CCDC39-201ENST00000442201 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 CDK5RAP2Q96SN8 1893 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 TOP1P11387 765 aaKnown RBP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 AKAP17AQ02040 695 aaKnown RBP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 NBPF9Q3BBW0 867 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 FAM83AQ86UY5 434 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 ZSCAN16Q9H4T2 348 aaPredicted RBP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 DNAJC18Q9H819 358 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 ZNF541Q9H0D2 1346 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 MPHOSPH10O00566 681 aaKnown RBP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 FBXO18Q8NFZ0 1043 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 CHAMP1Q96JM3 812 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC39-201ENST00000442201 MTMR4Q9NYA4 1195 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 MYH1P12882 1939 aa9.35□□□□□ -0.91
CCDC39-201ENST00000442201 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 DEXIO95424 95 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 NOVP48745 357 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 TNNI2P48788 182 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 GUCY1B3Q02153 619 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 CERKLQ49MI3 558 aaPredicted RBP9.34□□□□□ -0.91
CCDC39-201ENST00000442201 TMTC3Q6ZXV5 915 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
CCDC39-201ENST00000442201 RNF26Q9BY78 433 aaPredicted RBP9.34□□□□□ -0.91
CCDC39-201ENST00000442201 HERC5Q9UII4 1024 aaKnown RBP9.34□□□□□ -0.91
CCDC39-201ENST00000442201 H7C1D1 291 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 GNAQP50148 359 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 CCDC173Q0VFZ6 552 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 TRIM29Q14134 588 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 TATDN1Q6P1N9 297 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 GPC2Q8N158 579 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 PLEKHA8P1O95397 391 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 RESTQ13127 1097 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 TNFAIP1Q13829 316 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 SAMD7Q7Z3H4 446 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 CNTNAP1P78357 1384 aa9.34□□□□□ -0.91
CCDC39-201ENST00000442201 TTLL1O95922 423 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 EGFRP00533 1210 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC39-201ENST00000442201 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
CCDC39-201ENST00000442201 FUT2Q10981 343 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 GRM4Q14833 912 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 TBC1D10BQ4KMP7 808 aaPredicted RBP9.33□□□□□ -0.92
CCDC39-201ENST00000442201 OTUD7BQ6GQQ9 843 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 AIFM3Q96NN9 605 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 RNF181Q9P0P0 153 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 MTMR7Q9Y216 660 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 TRAK2O60296 914 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
CCDC39-201ENST00000442201 KIF4BQ2VIQ3 1234 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 SKOR2Q2VWA4 1001 aaPredicted RBP9.33□□□□□ -0.92
CCDC39-201ENST00000442201 TMEM39BQ9GZU3 492 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC39-201ENST00000442201 CLIP2Q9UDT6 1046 aa9.33□□□□□ -0.92
CCDC39-201ENST00000442201 TULP2O00295 520 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 PRPF3O43395 683 aaKnown RBP9.32□□□□□ -0.92
CCDC39-201ENST00000442201 KRT85P78386 507 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 KRT40Q6A162 431 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 FAM173BQ6P4H8 233 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 TMEM179Q6ZVK1 233 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 SRBD1Q8N5C6 995 aaKnown RBP9.32□□□□□ -0.92
CCDC39-201ENST00000442201 KANSL2Q9H9L4 492 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 GJB4Q9NTQ9 266 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 LMBRD1Q9NUN5 540 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 GPRC5DQ9NZD1 345 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
CCDC39-201ENST00000442201 CNPY2Q9Y2B0 182 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
CCDC39-201ENST00000442201 ECM29Q5VYK3 1845 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 XBP1P17861 261 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 GUCY1A2P33402 732 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 RASA3Q14644 834 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 LZTS2Q9BRK4 669 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 CNTNAP5Q8WYK1 1306 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 UBE2Q2LH0YL09 131 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
CCDC39-201ENST00000442201 ATP2B2Q01814 1243 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 CLEC10AQ8IUN9 316 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 GDPD2Q9HCC8 539 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 MAD2L2Q9UI95 211 aa9.32□□□□□ -0.92
CCDC39-201ENST00000442201 R3HCC1Q9Y3T6 440 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms