RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 HERC5Q9UII4 1024 aaKnown RBP5.89□□□□□ -1.47
CCDC140-202ENST00000440903 SERPINB13Q9UIV8 391 aa5.89□□□□□ -1.47
CCDC140-202ENST00000440903 RBM8AQ9Y5S9 174 aaKnown RBP5.89□□□□□ -1.47
CCDC140-202ENST00000440903 DDX60LQ5H9U9 1706 aaKnown RBP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ERICH2A1L162 156 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 GSG1L2A8MUP6 293 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 USP17L12C9JPN9 530 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 USP17L21D6R901 530 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 PRKAB2O43741 272 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 HMGB1P09429 215 aaKnown RBP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 IREB2P48200 963 aaKnown RBP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 FGD1P98174 961 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 NFIAQ12857 509 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ALX1Q15699 326 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 SLFNL1Q499Z3 407 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 C8orf34Q49A92 452 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 SBK1Q52WX2 424 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 CCDC178Q5BJE1 867 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 MFSD6Q6ZSS7 791 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ARMC9Q7Z3E5 817 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 USP48Q86UV5 1035 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 FOXP4Q8IVH2 680 aaPredicted RBP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ESR2Q92731 530 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 KIFC2Q96AC6 838 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 CDCA5Q96FF9 252 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 UBAC1Q9BSL1 405 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ZNF341Q9BYN7 854 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 SH2D4AQ9H788 454 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ZNF408Q9H9D4 720 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 EPB41L4AQ9HCS5 686 aaPredicted RBP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 ROBO3Q96MS0 1386 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 LAMA4Q16363 1823 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 FOCADQ5VW36 1801 aa5.88□□□□□ -1.47
CCDC140-202ENST00000440903 MYO5AQ9Y4I1 1855 aaKnown RBP5.88□□□□□ -1.47
CCDC140-202ENST00000440903 TSPY2A6NKD2 308 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 ADM5C9JUS6 153 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 MPHOSPH10O00566 681 aaKnown RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 TOMM70O94826 608 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 EGFRP00533 1210 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 FGAP02671 866 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 CHGBP05060 677 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 TSPY3P0CV98 308 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 TSPY8P0CW00 308 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 ANAPC15P60006 121 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 HAND2P61296 217 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 FKBP1BP68106 108 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 FSTL1Q12841 308 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 PTGDRQ13258 359 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 SLC4A8Q2Y0W8 1093 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 RRP12Q5JTH9 1297 aaKnown RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 C12orf60Q5U649 245 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 VPS53Q5VIR6 699 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 MAP1SQ66K74 1059 aaPredicted RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 CREB3L3Q68CJ9 461 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 IQCA1Q86XH1 822 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 ZNF444Q8N0Y2 327 aaPredicted RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 ZSCAN1Q8NBB4 408 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 IL27Q8NEV9 243 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 NCOA7Q8NI08 942 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 SNIP1Q8TAD8 396 aaKnown RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 MAP4K1Q92918 833 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 CCDC17Q96LX7 622 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 GLIS2Q9BZE0 524 aaPredicted RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 TMEM39BQ9GZU3 492 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 LSG1Q9H089 658 aaKnown RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 AS3MTQ9HBK9 375 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 DDX4Q9NQI0 724 aaKnown RBP5.87□□□□□ -1.47
CCDC140-202ENST00000440903 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 GINM1Q9NU53 330 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 PALD1Q9ULE6 856 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 PCDHAC2Q9Y5I4 1007 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 CSADQ9Y600 493 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 CNTNAP1P78357 1384 aa5.87□□□□□ -1.47
CCDC140-202ENST00000440903 PAPPA2Q9BXP8 1791 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 ASTN2O75129 1339 aaPredicted RBP5.86□□□□□ -1.47
CCDC140-202ENST00000440903 SLC27A2O14975 620 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 ORC4O43929 436 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 RANBP6O60518 1105 aaKnown RBP5.86□□□□□ -1.47
CCDC140-202ENST00000440903 ASNSP08243 561 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 SMPD1P17405 629 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 HSPA4P34932 840 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 HIRAP54198 1017 aaPredicted RBP5.86□□□□□ -1.47
CCDC140-202ENST00000440903 AKNAD1Q5T1N1 836 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 CTR9Q6PD62 1173 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 BLOC1S2Q6QNY1 142 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 C16orf86Q6ZW13 317 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 C2orf69Q8N8R5 385 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 STAG1Q8WVM7 1258 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 WRNIP1Q96S55 665 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 FEZ1Q99689 392 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 BACH2Q9BYV9 841 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 TBC1D2Q9BYX2 928 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 C22orf23Q9BZE7 217 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 PGAP2Q9UHJ9 254 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 ANAPC4Q9UJX5 808 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 MYH1P12882 1939 aa5.86□□□□□ -1.47
CCDC140-202ENST00000440903 DDTLA6NHG4 134 aaPredicted RBP5.85□□□□□ -1.47
CCDC140-202ENST00000440903 UNCXA6NJT0 531 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms