RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 KIF5BP33176 963 aa22.14■■□□□ 1.13
SNX17-203ENST00000440760 TRPM4Q8TD43 1214 aa22.14■■□□□ 1.13
SNX17-203ENST00000440760 CCDC17Q96LX7 622 aa22.14■■□□□ 1.13
SNX17-203ENST00000440760 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.14■■□□□ 1.13
SNX17-203ENST00000440760 V9GY48 417 aaPredicted RBP22.14■■□□□ 1.13
SNX17-203ENST00000440760 TTLL1O95922 423 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 PKN1Q16512 942 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 SLC35G1Q2M3R5 365 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 USP48Q86UV5 1035 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 FAM83AQ86UY5 434 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 SHISA4Q96DD7 197 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 CPVLQ9H3G5 476 aa22.13■■□□□ 1.13
SNX17-203ENST00000440760 AKAP17AQ02040 695 aaKnown RBP22.12■■□□□ 1.13
SNX17-203ENST00000440760 SEPT2Q15019 361 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 TPRNQ4KMQ1 711 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 USP17L2Q6R6M4 530 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 GPC2Q8N158 579 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 ZSCAN16Q9H4T2 348 aaPredicted RBP22.12■■□□□ 1.13
SNX17-203ENST00000440760 HACL1Q9UJ83 578 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 KCNJ14Q9UNX9 436 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 USP17L5A8MUK1 530 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 KIF23Q02241 960 aaPredicted RBP22.12■■□□□ 1.13
SNX17-203ENST00000440760 RASA3Q14644 834 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 ABCB5Q2M3G0 1257 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 MIGA2Q7L4E1 593 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 WASF1Q92558 559 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 MAP3K14Q99558 947 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 FTOQ9C0B1 505 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNX17-203ENST00000440760 GPRC5DQ9NZD1 345 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 TFIP11Q9UBB9 837 aaKnown RBP22.12■■□□□ 1.13
SNX17-203ENST00000440760 PGAP2Q9UHJ9 254 aa22.12■■□□□ 1.13
SNX17-203ENST00000440760 HERC5Q9UII4 1024 aaKnown RBP22.12■■□□□ 1.13
SNX17-203ENST00000440760 PRPF3O43395 683 aaKnown RBP22.11■■□□□ 1.13
SNX17-203ENST00000440760 GADD45BO75293 160 aaPredicted RBP22.11■■□□□ 1.13
SNX17-203ENST00000440760 DDNO94850 711 aaPredicted RBP22.11■■□□□ 1.13
SNX17-203ENST00000440760 KRT85P78386 507 aa22.11■■□□□ 1.13
SNX17-203ENST00000440760 TRIM29Q14134 588 aa22.11■■□□□ 1.13
SNX17-203ENST00000440760 VPS54Q9P1Q0 977 aa22.11■■□□□ 1.13
SNX17-203ENST00000440760 FRMPD2Q68DX3 1309 aaPredicted RBP22.11■■□□□ 1.13
SNX17-203ENST00000440760 GH2P01242 217 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 MMP14P50281 582 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 PALM3A6NDB9 673 aaPredicted RBP22.1■■□□□ 1.13
SNX17-203ENST00000440760 H7C1D1 291 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 PDHBP11177 359 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 VEGFAP15692 232 aaPredicted RBP22.1■■□□□ 1.13
SNX17-203ENST00000440760 PTMSP20962 102 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 EPS15P42566 896 aa22.1■■□□□ 1.13
SNX17-203ENST00000440760 DDX49Q9Y6V7 483 aaKnown RBP22.1■■□□□ 1.13
SNX17-203ENST00000440760 CYTH3O43739 400 aa22.09■■□□□ 1.13
SNX17-203ENST00000440760 PARP1P09874 1014 aaKnown RBP22.09■■□□□ 1.13
SNX17-203ENST00000440760 EEF2P13639 858 aaKnown RBP22.09■■□□□ 1.13
SNX17-203ENST00000440760 TNNI2P48788 182 aa22.09■■□□□ 1.13
SNX17-203ENST00000440760 ICA1Q05084 483 aa22.09■■□□□ 1.13
SNX17-203ENST00000440760 TMEM179Q6ZVK1 233 aa22.09■■□□□ 1.13
SNX17-203ENST00000440760 TMEM87AQ8NBN3 555 aa22.09■■□□□ 1.13
SNX17-203ENST00000440760 GPT2Q8TD30 523 aa22.09■■□□□ 1.13
SNX17-203ENST00000440760 GZF1Q9H116 711 aaPredicted RBP22.09■■□□□ 1.13
SNX17-203ENST00000440760 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.09■■□□□ 1.13
SNX17-203ENST00000440760 KLRF2D3W0D1 207 aa22.08■■□□□ 1.13
SNX17-203ENST00000440760 CEBPZQ03701 1054 aaKnown RBP22.08■■□□□ 1.13
SNX17-203ENST00000440760 TEPSINQ96N21 525 aa22.08■■□□□ 1.12
SNX17-203ENST00000440760 ATAD5Q96QE3 1844 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 RAD21O60216 631 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 MMP1P03956 469 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 TNFAIP1Q13829 316 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 ANGEL2Q5VTE6 544 aaKnown RBP22.07■■□□□ 1.12
SNX17-203ENST00000440760 SIAH1Q8IUQ4 282 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 KANSL2Q9H9L4 492 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 GNAQP50148 359 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 GPKOWQ92917 476 aaPredicted RBP eCLIP22.07■■□□□ 1.12
SNX17-203ENST00000440760 USP28Q96RU2 1077 aa22.07■■□□□ 1.12
SNX17-203ENST00000440760 SCG2P13521 617 aa22.06■■□□□ 1.12
SNX17-203ENST00000440760 HIRAP54198 1017 aaPredicted RBP22.06■■□□□ 1.12
SNX17-203ENST00000440760 GNL2Q13823 731 aaKnown RBP22.06■■□□□ 1.12
SNX17-203ENST00000440760 UBA5Q9GZZ9 404 aa22.06■■□□□ 1.12
SNX17-203ENST00000440760 GPCPD1Q9NPB8 672 aa22.06■■□□□ 1.12
SNX17-203ENST00000440760 GGA3Q9NZ52 723 aa22.06■■□□□ 1.12
SNX17-203ENST00000440760 SNHG28P0DPA3 235 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 GPR162Q16538 588 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 PFKFB3Q16875 520 aaPredicted RBP22.05■■□□□ 1.12
SNX17-203ENST00000440760 DIS3L2Q8IYB7 885 aaKnown RBP22.05■■□□□ 1.12
SNX17-203ENST00000440760 OXER1Q8TDS5 423 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 LEO1Q8WVC0 666 aaPredicted RBP22.05■■□□□ 1.12
SNX17-203ENST00000440760 DEFB129Q9H1M3 183 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 CABP5Q9NP86 173 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 NYAP2Q9P242 653 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 BTBD18B2RXH4 712 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 KLHL40Q2TBA0 621 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 SKOR2Q2VWA4 1001 aaPredicted RBP22.05■■□□□ 1.12
SNX17-203ENST00000440760 BRAPQ7Z569 592 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 SPATA32Q96LK8 384 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 ZBTB21Q9ULJ3 1066 aa22.05■■□□□ 1.12
SNX17-203ENST00000440760 TBC1D12O60347 775 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 NR5A1Q13285 461 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 CCDC96Q2M329 555 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 MYSM1Q5VVJ2 828 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 PRAMEF18Q5VWM3 479 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 HOMER1Q86YM7 354 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 RGS22Q8NE09 1264 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms