RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 CAVIN2O95810 425 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 KCNA3P22001 575 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 PSMD1Q99460 953 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 LZTS2Q9BRK4 669 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 IDI2Q9BXS1 227 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 CCDC192P0DO97 292 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 KIF5BP33176 963 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-204ENST00000440400 GOLGA6L4A6NEF3 574 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-204ENST00000440400 RILPL1Q5EBL4 403 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 DIS3L2Q8IYB7 885 aaKnown RBP15.16■□□□□ 0.02
ACTN4-204ENST00000440400 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
ACTN4-204ENST00000440400 DAGLBQ8NCG7 672 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 TNMDQ9H2S6 317 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 M0R2N6 131 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 ECE2O60344 883 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 RESP18Q5W5W9 173 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 CDC42EP5Q6NZY7 148 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-204ENST00000440400 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
ACTN4-204ENST00000440400 SERPINA10Q9UK55 444 aa15.16■□□□□ 0.02
ACTN4-204ENST00000440400 MYH4Q9Y623 1939 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 BAG6P46379 1132 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 GNAQP50148 359 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-204ENST00000440400 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-204ENST00000440400 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 TYRO3Q06418 890 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 SF3A1Q15459 793 aaKnown RBP15.15■□□□□ 0.02
ACTN4-204ENST00000440400 PNMA1Q8ND90 353 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 ZNF622Q969S3 477 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACTN4-204ENST00000440400 TEKT1Q969V4 418 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 SPZ1Q9BXG8 430 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 KAT14Q9H8E8 782 aa15.15■□□□□ 0.02
ACTN4-204ENST00000440400 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
ACTN4-204ENST00000440400 CUTAO60888 179 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 CHRNA5P30532 468 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 STK38Q15208 465 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 TMEM47Q9BQJ4 181 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 TSPY3P0CV98 308 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 TSPY8P0CW00 308 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 XBP1P17861 261 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 CRKP46108 304 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 SAFBQ15424 915 aaKnown RBP eCLIP15.14■□□□□ 0.01
ACTN4-204ENST00000440400 TTC12Q9H892 705 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-204ENST00000440400 MKNK2Q9HBH9 465 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 SCG2P13521 617 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 ME1P48163 572 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 ZNF444Q8N0Y2 327 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-204ENST00000440400 JMYQ8N9B5 988 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
ACTN4-204ENST00000440400 SAP30BPQ9UHR5 308 aaKnown RBP15.14■□□□□ 0.01
ACTN4-204ENST00000440400 FBXO2Q9UK22 296 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-204ENST00000440400 USP17L3A6NCW0 530 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 USP17L4A6NCW7 530 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 KRT2P35908 639 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 USP17L1Q7RTZ2 530 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 CMTR1Q8N1G2 835 aaKnown RBP15.13■□□□□ 0.01
ACTN4-204ENST00000440400 KCNJ14Q9UNX9 436 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 SHC4Q6S5L8 630 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 CCDC73Q6ZRK6 1079 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 CCDC125Q86Z20 511 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 FAM200AQ8TCP9 573 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 ZBTB9Q96C00 473 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 TRERF1Q96PN7 1200 aa15.13■□□□□ 0.01
ACTN4-204ENST00000440400 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
ACTN4-204ENST00000440400 PTPREP23469 700 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 TRAPPC10P48553 1259 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 NDUFA8P51970 172 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 CEBPZQ03701 1054 aaKnown RBP15.12■□□□□ 0.01
ACTN4-204ENST00000440400 NOLC1Q14978 699 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■■■□ 22.7
ACTN4-204ENST00000440400 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 V9GY48 417 aaPredicted RBP15.12■□□□□ 0.01
ACTN4-204ENST00000440400 TPRNQ4KMQ1 711 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 GALNT17Q6IS24 598 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 SHMT1P34896 483 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
ACTN4-204ENST00000440400 YDJCA8MPS7 323 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
ACTN4-204ENST00000440400 GMLQ99445 158 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 BPIFA3Q9BQP9 254 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 KCNQ5Q9NR82 932 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 USP40Q9NVE5 1235 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 CYTH3O43739 400 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 PFKFB1P16118 471 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 DHX36Q9H2U1 1008 aaKnown RBP15.11■□□□□ 0.01
ACTN4-204ENST00000440400 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms