RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLAMF8Q9P0V8 285 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 REV1Q9UBZ9 1251 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 KLHL3Q9UH77 587 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 GOLGA3Q08378 1498 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 C8AP07357 584 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 GBP1P32455 592 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 CLEC16AQ2KHT3 1053 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 ERMP1Q7Z2K6 904 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 CREG2Q8IUH2 290 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 OXR1Q8N573 874 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 DUSP13Q9UII6 198 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 TMEM59LQ9UK28 342 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 CEP162Q5TB80 1403 aa5.12□□□□□ -1.59
HMGB3P11-201ENST00000440127 MINDY4BA8MYZ0 360 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 RAG1P15918 1043 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 ENDOUP21128 410 aaKnown RBP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 TPP2P29144 1249 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 EIF4A3P38919 411 aaKnown RBP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 JAG1P78504 1218 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 FAM160A1Q05DH4 1040 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 DUSP4Q13115 394 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 LRRFIP1Q32MZ4 808 aaKnown RBP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 TTC6Q86TZ1 520 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 LILRA2Q8N149 483 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 DTWD2Q8NBA8 298 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 RIN3Q8TB24 985 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 KBTBD4Q9NVX7 518 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 GMIPQ9P107 970 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 GGT7Q9UJ14 662 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 CARMIL2Q6F5E8 1435 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 CEP164Q9UPV0 1460 aa5.11□□□□□ -1.59
HMGB3P11-201ENST00000440127 E9PSI1 815 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 CFTRP13569 1480 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 CCNFP41002 786 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 TOP2BQ02880 1626 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 CHRNEQ04844 493 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 MLANAQ16655 118 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 SPPL2CQ8IUH8 684 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 ABHD4Q8TB40 342 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 ENOX1Q8TC92 643 aaKnown RBP5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 MYLIPQ8WY64 445 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 KREMEN1Q96MU8 473 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 KCNQ5Q9NR82 932 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 CORINQ9Y5Q5 1042 aa5.1□□□□□ -1.59
HMGB3P11-201ENST00000440127 KIF21BO75037 1637 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 FITM1A5D6W6 292 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 DBX1A6NMT0 343 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 IGSF3O75054 1194 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 ZNF165P49910 485 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 EGR3Q06889 387 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 PDZD8Q8NEN9 1154 aa5.09□□□□□ -1.59
HMGB3P11-201ENST00000440127 CADPSQ9ULU8 1353 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 F6X3S4 739 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 RGS13O14921 159 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 GRIN3BO60391 1043 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 ATE1O95260 518 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 IMPDH2P12268 514 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 APOBRQ0VD83 1088 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 MRPL58Q14197 206 aaKnown RBP5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 GAB4Q2WGN9 574 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZNF648Q5T619 568 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 REXO1Q8N1G1 1221 aaKnown RBP5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 FBXO15Q8NCQ5 510 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 PPP1R13LQ8WUF5 828 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 Q96M66 194 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 TOX2Q96NM4 488 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 DUSP15Q9H1R2 295 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 SLC6A17Q9H1V8 727 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 EPB41L4BQ9H329 900 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 BIVM-ERCC5R4GMW8 1640 aa5.08□□□□□ -1.6
HMGB3P11-201ENST00000440127 SSU72P8A0A1W2PR75 194 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 RBM47A0AV96 593 aaKnown RBP5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 UNCXA6NJT0 531 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 UPK3BL1B0FP48 263 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 UPK3BL2E5RIL1 263 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 NFIBO00712 420 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 TLR3O15455 904 aaKnown RBP5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 TSPAN15O95858 294 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 HPXP02790 462 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 ESR1P03372 595 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 SRFP11831 508 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 RAP1GAPP47736 663 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 HK2P52789 917 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 RBM10P98175 930 aaKnown RBP5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 RNF111Q6ZNA4 994 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 ANKS4BQ8N8V4 417 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 CWC22Q9HCG8 908 aaKnown RBP5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 METTL5Q9NRN9 209 aaKnown RBP5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 POLR3KQ9Y2Y1 108 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 PCDHB14Q9Y5E9 798 aa5.07□□□□□ -1.6
HMGB3P11-201ENST00000440127 CLIP1P30622 1438 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 CNTNAP4Q9C0A0 1308 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZNF503-AS2A6NEH8 195 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 CLEC3AO75596 197 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms