RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 KANSL2Q9H9L4 492 aa23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 ZNF287Q9HBT7 754 aa23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 SPDYE16A6NNV3 312 aaPredicted RBP23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 SBK1Q52WX2 424 aa23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 GPR142Q7Z601 462 aa23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 SHISA4Q96DD7 197 aa23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 DEFB118Q96PH6 123 aa23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 IVNS1ABPQ9Y6Y0 642 aa23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 MYH4Q9Y623 1939 aa23.72■■□□□ 1.39
SHROOM1-204ENST00000440118 FLOT1O75955 427 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 ZKSCAN1P17029 563 aaPredicted RBP23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 RGS2P41220 211 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 COG2Q14746 738 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 Q3C1V9 767 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 NAPBQ9H115 298 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 GOPCQ9HD26 462 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 GJD2Q9UKL4 321 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 TMX2Q9Y320 296 aa23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 GREB1LQ9C091 1923 aaPredicted RBP23.71■■□□□ 1.39
SHROOM1-204ENST00000440118 PARP14Q460N5 1801 aa23.7■■□□□ 1.39
SHROOM1-204ENST00000440118 A0A0G2JMZ2 1700 aa23.7■■□□□ 1.39
SHROOM1-204ENST00000440118 ROBO3Q96MS0 1386 aa23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 TFRCP02786 760 aaKnown RBP23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 SLC3A2P08195 630 aaKnown RBP23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 EEF2P13639 858 aaKnown RBP23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 B4GALNT3Q6L9W6 998 aa23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 EVI5LQ96CN4 794 aa23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 SEC62Q99442 399 aaKnown RBP23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 LNPKQ9C0E8 428 aa23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 VCPKMTQ9H867 229 aa23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 EPB41L4AQ9HCS5 686 aaPredicted RBP23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 HOXC10Q9NYD6 342 aa23.7■■□□□ 1.38
SHROOM1-204ENST00000440118 SALL3Q9BXA9 1300 aa23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 PATL2C9JE40 543 aaKnown RBP23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 WDR46O15213 610 aaKnown RBP23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 FARP2O94887 1054 aaPredicted RBP23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 ZMYM1Q5SVZ6 1142 aa23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 LBX2Q6XYB7 198 aa23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 TRMT44Q8IYL2 757 aaKnown RBP23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 TRIB2Q92519 343 aa23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 APBA2Q99767 749 aa23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 HMX1Q9NP08 348 aaPredicted RBP23.69■■□□□ 1.38
SHROOM1-204ENST00000440118 CEP290O15078 2479 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 CNMDO75829 334 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 SGPL1O95470 568 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 PDE1AP54750 535 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 PLS1Q14651 629 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 IFNL3Q8IZI9 196 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 ZNF444Q8N0Y2 327 aaPredicted RBP23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 BTBD7Q9P203 1132 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 RLFQ13129 1914 aa23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 COL11A1P12107 1806 aaPredicted RBP23.68■■□□□ 1.38
SHROOM1-204ENST00000440118 XRCC5P13010 732 aaKnown RBP23.67■■□□□ 1.38
SHROOM1-204ENST00000440118 RASA1P20936 1047 aa23.67■■□□□ 1.38
SHROOM1-204ENST00000440118 POTEEQ6S8J3 1075 aa23.67■■□□□ 1.38
SHROOM1-204ENST00000440118 EXOC6Q8TAG9 804 aa23.67■■□□□ 1.38
SHROOM1-204ENST00000440118 PAK6Q9NQU5 681 aaPredicted RBP23.67■■□□□ 1.38
SHROOM1-204ENST00000440118 TRIM6-TRIM34B2RNG4 842 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 PRDM1O75626 825 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 PRKAR2AP13861 404 aaKnown RBP23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 PDE4BQ07343 736 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 MAP2K5Q13163 448 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 KIAA1755Q5JYT7 1200 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 MB21D1Q8N884 522 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 HTATIP2Q9BUP3 242 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
SHROOM1-204ENST00000440118 RPTORQ8N122 1335 aa23.65■■□□□ 1.38
SHROOM1-204ENST00000440118 TRIM32Q13049 653 aa23.65■■□□□ 1.38
SHROOM1-204ENST00000440118 MORN1Q5T089 497 aa23.65■■□□□ 1.38
SHROOM1-204ENST00000440118 CCDC129Q6ZRS4 1044 aa23.65■■□□□ 1.38
SHROOM1-204ENST00000440118 SIAH1Q8IUQ4 282 aa23.65■■□□□ 1.38
SHROOM1-204ENST00000440118 DPF3Q92784 378 aa23.65■■□□□ 1.38
SHROOM1-204ENST00000440118 SLC15A5A6NIM6 579 aa23.64■■□□□ 1.37
SHROOM1-204ENST00000440118 CAPN2P17655 700 aa23.64■■□□□ 1.37
SHROOM1-204ENST00000440118 DSG3P32926 999 aa23.64■■□□□ 1.37
SHROOM1-204ENST00000440118 ATG4CQ96DT6 458 aa23.64■■□□□ 1.37
SHROOM1-204ENST00000440118 SPATC1LQ9H0A9 340 aa23.64■■□□□ 1.37
SHROOM1-204ENST00000440118 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.37
SHROOM1-204ENST00000440118 TSPY3P0CV98 308 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 TSPY8P0CW00 308 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 PTPREP23469 700 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 PPARAQ07869 468 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 FAM83BQ5T0W9 1011 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 SMC5Q8IY18 1101 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 MOV10L1Q9BXT6 1211 aaKnown RBP23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 ZNF236Q9UL36 1845 aa23.63■■□□□ 1.37
SHROOM1-204ENST00000440118 CCL14Q16627 93 aa23.62■■□□□ 1.37
SHROOM1-204ENST00000440118 CHD1LQ86WJ1 897 aa23.62■■□□□ 1.37
SHROOM1-204ENST00000440118 NCAPG2Q86XI2 1143 aa23.62■■□□□ 1.37
SHROOM1-204ENST00000440118 RILPL2Q969X0 211 aa23.62■■□□□ 1.37
SHROOM1-204ENST00000440118 ISY1Q9ULR0 285 aaKnown RBP23.62■■□□□ 1.37
SHROOM1-204ENST00000440118 SLC34A2O95436 690 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 ERCC3P19447 782 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 GRB14Q14449 540 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 MFSD14CQ5VZR4 134 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 DPP9Q86TI2 863 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 USP6NLQ92738 828 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 HELLSQ9NRZ9 838 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms