RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.18
LIMD1-202ENST00000440097 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.18
LIMD1-202ENST00000440097 CABP5Q9NP86 173 aa16.21■□□□□ 0.18
LIMD1-202ENST00000440097 ZBTB22O15209 634 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 PFKFB1P16118 471 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 KIF5BP33176 963 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 TMTC3Q6ZXV5 915 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 C2CD5Q86YS7 1000 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 KRT222Q8N1A0 295 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
LIMD1-202ENST00000440097 CLIC6Q96NY7 704 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 MXD3Q9BW11 206 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 ZNF202O95125 648 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 ARID5BQ14865 1188 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
LIMD1-202ENST00000440097 ZNF215Q9UL58 517 aaPredicted RBP16.2■□□□□ 0.18
LIMD1-202ENST00000440097 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
LIMD1-202ENST00000440097 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
LIMD1-202ENST00000440097 SCNN1DP51172 638 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
LIMD1-202ENST00000440097 FLT1P17948 1338 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 ECM29Q5VYK3 1845 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 H0YIN7 160 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 CMA1P23946 247 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 STX1AQ16623 288 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 AXDND1Q5T1B0 1012 aaPredicted RBP16.19■□□□□ 0.18
LIMD1-202ENST00000440097 MAP3K14Q99558 947 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 IL17RBQ9NRM6 502 aa16.19■□□□□ 0.18
LIMD1-202ENST00000440097 PPP6R2O75170 966 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 KRT2P35908 639 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 SYKP43405 635 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 PKN1Q16512 942 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 LRRC8AQ8IWT6 810 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 DBNDD1Q9H9R9 158 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 DAGLAQ9Y4D2 1042 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 LAMB1P07942 1786 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 BECN2A8MW95 431 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 PTPAQ15257 358 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 EYA3Q99504 573 aa16.18■□□□□ 0.18
LIMD1-202ENST00000440097 CDC25BP30305 580 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 FUT2Q10981 343 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 FAM205AQ6ZU69 1335 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 BIN1O00499 593 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 CDK8P49336 464 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 TOB1P50616 345 aaPredicted RBP16.17■□□□□ 0.18
LIMD1-202ENST00000440097 RHBDL3P58872 404 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 NLRP5P59047 1200 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 PTPN14Q15678 1187 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 C11orf57Q6ZUT1 292 aaPredicted RBP16.17■□□□□ 0.18
LIMD1-202ENST00000440097 KRI1Q8N9T8 703 aaKnown RBP16.17■□□□□ 0.18
LIMD1-202ENST00000440097 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 MYH6P13533 1939 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 ANKRD31Q8N7Z5 1873 aa16.17■□□□□ 0.18
LIMD1-202ENST00000440097 CNTNAP5Q8WYK1 1306 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 FBXO38Q6PIJ6 1188 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 SHC4Q6S5L8 630 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 FAM205CA6NFA0 338 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 RASA1P20936 1047 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 CHRNA5P30532 468 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 ELF2Q15723 593 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 CERS5Q8N5B7 392 aa16.16■□□□□ 0.18
LIMD1-202ENST00000440097 SCG2P13521 617 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 NYAP1Q6ZVC0 841 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 STAG2Q8N3U4 1231 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 FAM163AQ96GL9 167 aaPredicted RBP16.15■□□□□ 0.18
LIMD1-202ENST00000440097 PHF20Q9BVI0 1012 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 CEP131Q9UPN4 1083 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 CUTAO60888 179 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 CEP57L1Q8IYX8 460 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 KIAA1468Q9P260 1216 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 PPP1R1BQ9UD71 204 aaPredicted RBP16.15■□□□□ 0.18
LIMD1-202ENST00000440097 ROBO3Q96MS0 1386 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 GAKO14976 1311 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 CCDC66A2RUB6 948 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 CAVIN2O95810 425 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 SKILP12757 684 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 RBM5P52756 815 aaKnown RBP eCLIP16.15■□□□□ 0.18
LIMD1-202ENST00000440097 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.15■□□□□ 0.18
LIMD1-202ENST00000440097 ST7Q9NRC1 585 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
LIMD1-202ENST00000440097 STK32BQ9NY57 414 aa16.15■□□□□ 0.18
LIMD1-202ENST00000440097 TRIM75PA6NK02 468 aa16.14■□□□□ 0.17
LIMD1-202ENST00000440097 IQCB1Q15051 598 aa16.14■□□□□ 0.17
LIMD1-202ENST00000440097 C16orf86Q6ZW13 317 aa16.14■□□□□ 0.17
LIMD1-202ENST00000440097 GPKOWQ92917 476 aaPredicted RBP eCLIP16.14■□□□□ 0.17
LIMD1-202ENST00000440097 TMEM47Q9BQJ4 181 aa16.14■□□□□ 0.17
LIMD1-202ENST00000440097 NAT10Q9H0A0 1025 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms