RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TBC1D8O95759 1140 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TRDNQ13061 729 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ZYXQ15942 572 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 FAM47AQ5JRC9 791 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TMEM179Q6ZVK1 233 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SLC3A2P08195 630 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ME3Q16798 604 aa17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TREML2Q5T2D2 321 aa17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 FEZ1Q99689 392 aa17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
TNFRSF1A-204ENST00000440083 NEDD4P46934 1319 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 A0A1W2PRG0 241 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 INHBEP58166 350 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ICA1Q05084 483 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 PDE4BQ07343 736 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SIAH1Q8IUQ4 282 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 BRF1Q92994 677 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SAGE1Q9NXZ1 904 aa17.02■□□□□ 0.32
TNFRSF1A-204ENST00000440083 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PDHXO00330 501 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 MCM5P33992 734 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 LBX1P52954 281 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 BACE1P56817 501 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CRHR2Q13324 411 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 NECAB1Q8N987 351 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 EMILIN3Q9NT22 766 aa17.01■□□□□ 0.31
TNFRSF1A-204ENST00000440083 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 USP17L10C9JJH3 530 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CA12O43570 354 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ORC4O43929 436 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 GJB2P29033 226 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CTCFP49711 727 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TFAP4Q01664 338 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 EXOSC10Q01780 885 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 STK3Q13188 491 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PKP1Q13835 747 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 SH3D19Q5HYK7 790 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ANKRD23Q86SG2 305 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PLIN4Q96Q06 1357 aa17■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PRC1O43663 620 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 RANBP6O60518 1105 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 NMT2O60551 498 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 BAG4O95429 457 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 BRD1O95696 1058 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 FGRP09769 529 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CYP2C8P10632 490 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 FASTKD5Q7L8L6 764 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 MB21D2Q8IYB1 491 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 GTF3C6Q969F1 213 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CEP95Q96GE4 821 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TMOD4Q9NZQ9 345 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ALDH1A1P00352 501 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TSPY3P0CV98 308 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TSPY8P0CW00 308 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 USP17L2Q6R6M4 530 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 MFSD6Q6ZSS7 791 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 KIAA1683Q9H0B3 1180 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 KANSL2Q9H9L4 492 aa16.98■□□□□ 0.31
TNFRSF1A-204ENST00000440083 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 PDCP20941 246 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 APOBRQ0VD83 1088 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ST3GAL1Q11201 340 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 RNF41Q9H4P4 317 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-204ENST00000440083 ARHGEF10LQ9HCE6 1279 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms