RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ZNF697Q5TEC3 545 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 LHX8Q68G74 356 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 FOCADQ5VW36 1801 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 USP17L21D6R901 530 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 PRKAB2O43741 272 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 ZFYP08048 801 aaPredicted RBP13.79□□□□□ -0.2
IRF1-204ENST00000439555 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
IRF1-204ENST00000439555 CCNA1P78396 465 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
IRF1-204ENST00000439555 SEPT2Q15019 361 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 LRRC26Q2I0M4 334 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 Q3C1V9 767 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 GIMAP6Q6P9H5 292 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 LBHD1Q9BQE6 289 aaPredicted RBP13.79□□□□□ -0.2
IRF1-204ENST00000439555 PCDHB15Q9Y5E8 787 aa13.79□□□□□ -0.2
IRF1-204ENST00000439555 CYP2D6P10635 497 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 CYP2B6P20813 491 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 CACNB2Q08289 660 aaPredicted RBP13.78□□□□□ -0.2
IRF1-204ENST00000439555 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
IRF1-204ENST00000439555 SLFNL1Q499Z3 407 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 C16orf86Q6ZW13 317 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
IRF1-204ENST00000439555 LPAR1Q92633 364 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 USP6NLQ92738 828 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 STRBPQ96SI9 672 aaKnown RBP13.78□□□□□ -0.2
IRF1-204ENST00000439555 CDX2Q99626 313 aaPredicted RBP13.78□□□□□ -0.2
IRF1-204ENST00000439555 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
IRF1-204ENST00000439555 SEMA6BQ9H3T3 888 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 SH2D4AQ9H788 454 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 HOXC10Q9NYD6 342 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
IRF1-204ENST00000439555 A0A1W2PRG0 241 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 MPHOSPH10O00566 681 aaKnown RBP13.77□□□□□ -0.21
IRF1-204ENST00000439555 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.21
IRF1-204ENST00000439555 CDK8P49336 464 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
IRF1-204ENST00000439555 COG2Q14746 738 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
IRF1-204ENST00000439555 SBK1Q52WX2 424 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 MORN1Q5T089 497 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 CTR9Q6PD62 1173 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 GPR142Q7Z601 462 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 PLEKHH3Q7Z736 793 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 APPBP2Q92624 585 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 PORCNQ9H237 461 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
IRF1-204ENST00000439555 TMX2Q9Y320 296 aa13.77□□□□□ -0.21
IRF1-204ENST00000439555 MYO5AQ9Y4I1 1855 aaKnown RBP13.76□□□□□ -0.21
IRF1-204ENST00000439555 MUC3AQ02505 3323 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 ERC2O15083 957 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 CNMDO75829 334 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 GNAT2P19087 354 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 RGS2P41220 211 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 EVX2Q03828 476 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 AAMPQ13685 434 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 SIAH1Q8IUQ4 282 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 MAFAQ8NHW3 353 aaPredicted RBP13.76□□□□□ -0.21
IRF1-204ENST00000439555 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 KANSL2Q9H9L4 492 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
IRF1-204ENST00000439555 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
IRF1-204ENST00000439555 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
IRF1-204ENST00000439555 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
IRF1-204ENST00000439555 MSCO60682 206 aa13.75□□□□□ -0.21
IRF1-204ENST00000439555 CHGBP05060 677 aa13.75□□□□□ -0.21
IRF1-204ENST00000439555 ZKSCAN1P17029 563 aaPredicted RBP13.75□□□□□ -0.21
IRF1-204ENST00000439555 ICA1Q05084 483 aa13.75□□□□□ -0.21
IRF1-204ENST00000439555 MB21D1Q8N884 522 aa13.75□□□□□ -0.21
IRF1-204ENST00000439555 OSBP2Q969R2 916 aa13.75□□□□□ -0.21
IRF1-204ENST00000439555 CDK5RAP2Q96SN8 1893 aa13.75□□□□□ -0.21
IRF1-204ENST00000439555 CDH23Q9H251 3354 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 SLC15A5A6NIM6 579 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 PEX10O60683 326 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 HOXC6P09630 235 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 AKR1B1P15121 316 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 PTPREP23469 700 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
IRF1-204ENST00000439555 MAP2K5Q13163 448 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 FAM161BQ96MY7 647 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 APBA2Q99767 749 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 SENP6Q9GZR1 1112 aaPredicted RBP13.74□□□□□ -0.21
IRF1-204ENST00000439555 VCPKMTQ9H867 229 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
IRF1-204ENST00000439555 MYH1P12882 1939 aa13.73□□□□□ -0.21
IRF1-204ENST00000439555 TMEM265A0A087WTH1 108 aa13.73□□□□□ -0.21
IRF1-204ENST00000439555 CYP2D7A0A087X1C5 515 aa13.73□□□□□ -0.21
IRF1-204ENST00000439555 WDR46O15213 610 aaKnown RBP13.73□□□□□ -0.21
IRF1-204ENST00000439555 STRNO43815 780 aa13.73□□□□□ -0.21
IRF1-204ENST00000439555 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms