RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 PLS1Q14651 629 aa16.27■□□□□ 0.2
GARNL3-206ENST00000439286 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
GARNL3-206ENST00000439286 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
GARNL3-206ENST00000439286 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
GARNL3-206ENST00000439286 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.2
GARNL3-206ENST00000439286 TMX2Q9Y320 296 aa16.27■□□□□ 0.2
GARNL3-206ENST00000439286 FLOT1O75955 427 aa16.26■□□□□ 0.19
GARNL3-206ENST00000439286 HOXC6P09630 235 aa16.26■□□□□ 0.19
GARNL3-206ENST00000439286 CDK8P49336 464 aa16.26■□□□□ 0.19
GARNL3-206ENST00000439286 GRB14Q14449 540 aa16.26■□□□□ 0.19
GARNL3-206ENST00000439286 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
GARNL3-206ENST00000439286 RAD21O60216 631 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 SMARCA5O60264 1052 aaPredicted RBP16.25■□□□□ 0.19
GARNL3-206ENST00000439286 AKR1B1P15121 316 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 DSG3P32926 999 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 EVX2Q03828 476 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 LRRFIP1Q32MZ4 808 aaKnown RBP16.25■□□□□ 0.19
GARNL3-206ENST00000439286 SLFNL1Q499Z3 407 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 C20orf194Q5TEA3 1177 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 LHX8Q68G74 356 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 NCAPG2Q86XI2 1143 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
GARNL3-206ENST00000439286 SPATC1LQ9H0A9 340 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 PRO3102Q9H379 93 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 MROH8Q9H579 483 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 VCPKMTQ9H867 229 aa16.25■□□□□ 0.19
GARNL3-206ENST00000439286 ARPP21Q9UBL0 812 aaPredicted RBP16.25■□□□□ 0.19
GARNL3-206ENST00000439286 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
GARNL3-206ENST00000439286 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
GARNL3-206ENST00000439286 SYN1P17600 705 aa16.24■□□□□ 0.19
GARNL3-206ENST00000439286 ERCC3P19447 782 aa16.24■□□□□ 0.19
GARNL3-206ENST00000439286 ADORA2AP29274 412 aa16.24■□□□□ 0.19
GARNL3-206ENST00000439286 BMP8BP34820 402 aa16.24■□□□□ 0.19
GARNL3-206ENST00000439286 MNX1P50219 401 aaPredicted RBP16.24■□□□□ 0.19
GARNL3-206ENST00000439286 C16orf86Q6ZW13 317 aa16.24■□□□□ 0.19
GARNL3-206ENST00000439286 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
GARNL3-206ENST00000439286 GOPCQ9HD26 462 aa16.24■□□□□ 0.19
GARNL3-206ENST00000439286 PTPRFP10586 1907 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 MGAMO43451 1857 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 CYP2C19P33261 490 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 SENP6Q9GZR1 1112 aaPredicted RBP16.23■□□□□ 0.19
GARNL3-206ENST00000439286 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 FLRT1Q9NZU1 646 aa16.23■□□□□ 0.19
GARNL3-206ENST00000439286 SIPA1L1O43166 1804 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 SLC25A27O95847 323 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
GARNL3-206ENST00000439286 OLFML2BQ68BL8 750 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 ARRDC4Q8NCT1 418 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 GDF15Q99988 308 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
GARNL3-206ENST00000439286 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 APPP05067 770 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
GARNL3-206ENST00000439286 COL6A1P12109 1028 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 FCER1AP12319 257 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 GNAT2P19087 354 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 GIMAP6Q6P9H5 292 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 CLEC10AQ8IUN9 316 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 SIAH1Q8IUQ4 282 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 ABRAQ8N0Z2 381 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 KBTBD3Q8NAB2 608 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
GARNL3-206ENST00000439286 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
GARNL3-206ENST00000439286 ATAD5Q96QE3 1844 aa16.21■□□□□ 0.19
GARNL3-206ENST00000439286 PFASO15067 1338 aa16.2■□□□□ 0.18
GARNL3-206ENST00000439286 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
GARNL3-206ENST00000439286 CHGBP05060 677 aa16.2■□□□□ 0.18
GARNL3-206ENST00000439286 COPB2P35606 906 aa16.2■□□□□ 0.18
GARNL3-206ENST00000439286 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
GARNL3-206ENST00000439286 KIAA1755Q5JYT7 1200 aa16.2■□□□□ 0.18
GARNL3-206ENST00000439286 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
GARNL3-206ENST00000439286 APPBP2Q92624 585 aa16.2■□□□□ 0.18
GARNL3-206ENST00000439286 UBE2OQ9C0C9 1292 aaKnown RBP16.2■□□□□ 0.18
GARNL3-206ENST00000439286 PRKAG2Q9UGJ0 569 aa16.2■□□□□ 0.18
GARNL3-206ENST00000439286 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
GARNL3-206ENST00000439286 KBTBD13C9JR72 458 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 DNM1LO00429 736 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 ERC2O15083 957 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
GARNL3-206ENST00000439286 TDO2P48775 406 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 KCTD2Q14681 263 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 TMEM132BQ14DG7 1078 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 SBK1Q52WX2 424 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 STK11IPQ8N1F8 1099 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 MMP19Q99542 508 aa16.19■□□□□ 0.18
GARNL3-206ENST00000439286 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
GARNL3-206ENST00000439286 SEPT4O43236 478 aa16.18■□□□□ 0.18
GARNL3-206ENST00000439286 COBLO75128 1261 aa16.18■□□□□ 0.18
GARNL3-206ENST00000439286 STAT3P40763 770 aa16.18■□□□□ 0.18
GARNL3-206ENST00000439286 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
GARNL3-206ENST00000439286 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
GARNL3-206ENST00000439286 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms