RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 SLIT3O75094 1523 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 ADCY7P51828 1080 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 SLC39A14Q15043 492 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 H0YHG0 523 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 GPSM2P81274 684 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 EXOSC10Q01780 885 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 SPAG1Q07617 926 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCDC150Q8NCX0 1101 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 SH2D4AQ9H788 454 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 CT47A1Q5JQC4 288 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 POLR3EQ9NVU0 708 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 PLEKHG2Q9H7P9 1386 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 KIF2AO00139 706 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 PLCD1P51178 756 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 POSTNQ15063 836 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 INF2Q27J81 1249 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 TCERG1LQ5VWI1 586 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 MAPK8IP1Q9UQF2 711 aa13.05□□□□□ -0.32
TRAPPC9-202ENST00000438773 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 USH1GQ495M9 461 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 LY9Q9HBG7 655 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 PNOCQ13519 176 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 SYCP1Q15431 976 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 ENOX2Q16206 610 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCDC125Q86Z20 511 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 FAM114A1Q8IWE2 563 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 NSUN4Q96CB9 384 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 SETD1AO15047 1707 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 A0A1W2PQ27 194 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 A0A1W2PQ64 194 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 A0A1W2PQD8 194 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 RAD17O75943 681 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 DNA2P51530 1060 aa13.04□□□□□ -0.32
TRAPPC9-202ENST00000438773 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 MMP1P03956 469 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 NLRP12P59046 1061 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 PTGDRQ13258 359 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 CTR9Q6PD62 1173 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 LEKR1Q6ZMV7 388 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 ENAHQ8N8S7 591 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 ANKRD7Q92527 254 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 CENPHQ9H3R5 247 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.328e-7■■■■■ 45.8
TRAPPC9-202ENST00000438773 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 C21orf2O43822 256 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 CDK8P49336 464 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 ICA1Q05084 483 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 WWC2Q6AWC2 1192 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCDC17Q96LX7 622 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 PLEKHA8P1O95397 391 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 CDC27P30260 824 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 RUFY1Q96T51 708 aa13.03□□□□□ -0.32
TRAPPC9-202ENST00000438773 NMT2O60551 498 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 TRIM21P19474 475 aaKnown RBP13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 MLKLQ8NB16 471 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 RASGRP4Q8TDF6 673 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 CACTINQ8WUQ7 758 aaKnown RBP13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 GLT8D2Q9H1C3 349 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 DGKHQ86XP1 1220 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 TSPYL1Q9H0U9 437 aa13.02□□□□□ -0.32
TRAPPC9-202ENST00000438773 CACNB3P54284 484 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 SPA17Q15506 151 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms