RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ASPNQ9BXN1 380 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 DDX41Q9UJV9 622 aaKnown RBP5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 KCNH3Q9ULD8 1083 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 MEIS3P2A8K0S8 358 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 SCAMP3O14828 347 aaKnown RBP5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 GDNFP39905 211 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 CCNFP41002 786 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 ARSHQ5FYA8 562 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 USP48Q86UV5 1035 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 TSPYL5Q86VY4 417 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 METTL16Q86W50 562 aaKnown RBP5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 KIAA0825Q8IV33 1275 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 PHACTR4Q8IZ21 702 aa5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 TRIT1Q9H3H1 467 aaKnown RBP5.66□□□□□ -1.5
HMGB3P12-201ENST00000438745 TNFRSF10CO14798 259 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 TPP2P29144 1249 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 GBP1P32455 592 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 LRRFIP1Q32MZ4 808 aaKnown RBP5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 ZNF394Q53GI3 561 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 INTS3Q68E01 1043 aaKnown RBP5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 OGFOD2Q6N063 350 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 GK5Q6ZS86 529 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 TMEM40Q8WWA1 233 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 GPATCH2Q9NW75 528 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 ZNF281Q9Y2X9 895 aa5.65□□□□□ -1.5
HMGB3P12-201ENST00000438745 NME1P15531 152 aaKnown RBP5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 TNNI2P48788 182 aa5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 NBPF12Q5TAG4 269 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 OVOS1Q6IE37 1185 aa5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 NLRC3Q7RTR2 1065 aa5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 POU5F2Q8N7G0 328 aa5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 ENOX1Q8TC92 643 aaKnown RBP5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 CCDC120Q96HB5 630 aa5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 ALPK1Q96QP1 1244 aa5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 KIAA1522Q9P206 1035 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P12-201ENST00000438745 SHISA3A0PJX4 238 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 UNCXA6NJT0 531 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 RAG1P15918 1043 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 MCM4P33991 863 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 AFMP43652 599 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 RAD51AP2Q09MP3 1159 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 FZD5Q13467 585 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 NBPF9Q3BBW0 867 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 FYB2Q5VWT5 728 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 RBBP8NLQ8NC74 664 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 FAM168AQ92567 244 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 MRRFQ96E11 262 aaKnown RBP5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 ANTXR1Q9H6X2 564 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 ZNRF3Q9ULT6 936 aa5.63□□□□□ -1.51
HMGB3P12-201ENST00000438745 DNAJC25-GNG10A0A024R161 153 aa5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 ZNF503-AS2A6NEH8 195 aa5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 RALGPS1Q5JS13 557 aa5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 CREG2Q8IUH2 290 aa5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 SP110Q9HB58 689 aa5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 ARID1BQ8NFD5 2236 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P12-201ENST00000438745 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 IMPDH2P12268 514 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 POLR2BP30876 1174 aaKnown RBP5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 RNF4P78317 190 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 ZSWIM9Q86XI8 627 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 TMEM192Q8IY95 271 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 ZNF654Q8IZM8 581 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 SYTL5Q8TDW5 730 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 ADAMTS10Q9H324 1103 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 DUSP13Q9UII6 198 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 TMEM59LQ9UK28 342 aa5.61□□□□□ -1.51
HMGB3P12-201ENST00000438745 HPXP02790 462 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 ACRP10323 421 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 HDLBPQ00341 1268 aaKnown RBP5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 COL9A2Q14055 689 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 USHBP1Q8N6Y0 703 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 DAGLBQ8NCG7 672 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 RASGRP4Q8TDF6 673 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 KIRREL1Q96J84 757 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 HDAC8Q9BY41 377 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 SLAMF8Q9P0V8 285 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 PCDHA11Q9Y5I1 949 aa5.6□□□□□ -1.51
HMGB3P12-201ENST00000438745 C8AP07357 584 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 GLI1P08151 1106 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 ZGLP1P0C6A0 271 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 JAG1P78504 1218 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 TEKQ02763 1124 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 EGR3Q06889 387 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 NMIQ13287 307 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 NR0B2Q15466 257 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 KCNMB1Q16558 191 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 TTC6Q86TZ1 520 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 SPATA32Q96LK8 384 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 FAM53CQ9NYF3 392 aa5.59□□□□□ -1.51
HMGB3P12-201ENST00000438745 CLEC3AO75596 197 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 SOX9P48436 509 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 ERVFC1P60507 584 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 MESP2Q0VG99 397 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 PAK2Q13177 524 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms