RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CLIP2Q9UDT6 1046 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 IGKV6D-41A0A0C4DH26 115 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 TTLL1O95922 423 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 GNRH1P01148 92 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 NT5C2P49902 561 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 RRP12Q5JTH9 1297 aaKnown RBP19.38■□□□□ 0.69
CTSD-205ENST00000438213 CASC1Q6TDU7 716 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 STAG1Q8WVM7 1258 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 MKL1Q969V6 931 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 MCOLN1Q9GZU1 580 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 RPAP3Q9H6T3 665 aaPredicted RBP19.38■□□□□ 0.69
CTSD-205ENST00000438213 HOXC10Q9NYD6 342 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 TRIM17Q9Y577 477 aa19.38■□□□□ 0.69
CTSD-205ENST00000438213 RAD21O60216 631 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 HOXD10P28358 340 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 HERVK_113P62684 666 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 ANKRD13CQ8N6S4 541 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 CEP95Q96GE4 821 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 IL25Q9H293 177 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 SYNPO2Q9UMS6 1093 aa19.37■□□□□ 0.69
CTSD-205ENST00000438213 FMNL1O95466 1100 aaPredicted RBP19.36■□□□□ 0.69
CTSD-205ENST00000438213 PSMC4P43686 418 aa19.36■□□□□ 0.69
CTSD-205ENST00000438213 COG2Q14746 738 aa19.36■□□□□ 0.69
CTSD-205ENST00000438213 FAM110CQ1W6H9 321 aa19.36■□□□□ 0.69
CTSD-205ENST00000438213 OTOP1Q7RTM1 612 aa19.36■□□□□ 0.69
CTSD-205ENST00000438213 SPICE1Q8N0Z3 855 aa19.36■□□□□ 0.69
CTSD-205ENST00000438213 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
CTSD-205ENST00000438213 LOC285556D6RIA3 1793 aa19.36■□□□□ 0.69
CTSD-205ENST00000438213 PLIN4Q96Q06 1357 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 WDR46O15213 610 aaKnown RBP19.35■□□□□ 0.69
CTSD-205ENST00000438213 FCGRTP55899 365 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 GPRC5AQ8NFJ5 357 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 ESR2Q92731 530 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 ESYT1Q9BSJ8 1104 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 TANGO6Q9C0B7 1094 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 TACC3Q9Y6A5 838 aa19.35■□□□□ 0.69
CTSD-205ENST00000438213 F5H6K3 240 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 PTH1RQ03431 593 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 KLRC3Q07444 240 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 KIAA1755Q5JYT7 1200 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 FBXO46Q6PJ61 603 aaPredicted RBP19.34■□□□□ 0.69
CTSD-205ENST00000438213 TBC1D10CQ8IV04 446 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 CNNM2Q9H8M5 875 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 TCP11L1Q9NUJ3 509 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 MORF4L1Q9UBU8 362 aa19.34■□□□□ 0.69
CTSD-205ENST00000438213 CDC45O75419 566 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 PRMT2P55345 433 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 CCDC178Q5BJE1 867 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 LBX2Q6XYB7 198 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 MAP4K1Q92918 833 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 KRT23Q9C075 422 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 NBPF3Q9H094 633 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 IL17RBQ9NRM6 502 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 RBPJLQ9UBG7 517 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 STX8Q9UNK0 236 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 RABGAP1Q9Y3P9 1069 aa19.33■□□□□ 0.68
CTSD-205ENST00000438213 FLOT1O75955 427 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
CTSD-205ENST00000438213 ABHD8Q96I13 439 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 TRIM47Q96LD4 638 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 TTC14Q96N46 770 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 PAGR1Q9BTK6 254 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 ARHGAP39Q9C0H5 1083 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 PTPN22Q9Y2R2 807 aa19.32■□□□□ 0.68
CTSD-205ENST00000438213 ECM2O94769 699 aaPredicted RBP19.31■□□□□ 0.68
CTSD-205ENST00000438213 NDUFB10O96000 172 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 DSG3P32926 999 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 CCNA1P78396 465 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 TRDNQ13061 729 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 IQCA1Q86XH1 822 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 MB21D1Q8N884 522 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 GMCL1P1Q8NEA9 526 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 COA7Q96BR5 231 aa19.31■□□□□ 0.68
CTSD-205ENST00000438213 MYPNQ86TC9 1320 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 SPDYE16A6NNV3 312 aaPredicted RBP19.3■□□□□ 0.68
CTSD-205ENST00000438213 TNPO2O14787 897 aaKnown RBP19.3■□□□□ 0.68
CTSD-205ENST00000438213 NMT2O60551 498 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 ERVK-9P63128 1117 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 ERVK-24P63145 666 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 CAP1Q01518 475 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 FAM83BQ5T0W9 1011 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 SLFN13Q68D06 897 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 LRRC47Q8N1G4 583 aaKnown RBP19.3■□□□□ 0.68
CTSD-205ENST00000438213 TXNRD2Q9NNW7 524 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 SRRDQ9UH36 339 aa19.3■□□□□ 0.68
CTSD-205ENST00000438213 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
CTSD-205ENST00000438213 KDM4AO75164 1064 aa19.29■□□□□ 0.68
CTSD-205ENST00000438213 TOP1P11387 765 aaKnown RBP19.29■□□□□ 0.68
CTSD-205ENST00000438213 CTGFP29279 349 aa19.29■□□□□ 0.68
CTSD-205ENST00000438213 NOVP48745 357 aa19.29■□□□□ 0.68
CTSD-205ENST00000438213 Q3C1V9 767 aa19.29■□□□□ 0.68
CTSD-205ENST00000438213 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
CTSD-205ENST00000438213 LSG1Q9H089 658 aaKnown RBP19.29■□□□□ 0.68
CTSD-205ENST00000438213 ANO2Q9NQ90 1003 aa19.29■□□□□ 0.68
CTSD-205ENST00000438213 RBM8AQ9Y5S9 174 aaKnown RBP19.29■□□□□ 0.68
CTSD-205ENST00000438213 NEDD4P46934 1319 aa19.28■□□□□ 0.68
CTSD-205ENST00000438213 B4E1Z4 1266 aa19.28■□□□□ 0.68
CTSD-205ENST00000438213 CYP21A2P08686 494 aa19.28■□□□□ 0.68
CTSD-205ENST00000438213 MAPK4P31152 587 aa19.28■□□□□ 0.68
CTSD-205ENST00000438213 PRPF38AQ8NAV1 312 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms