RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 C12orf42Q96LP6 360 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.33
HMGCL-204ENST00000436439 PRO3102Q9H379 93 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 PARP14Q460N5 1801 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 CEP290O15078 2479 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 CNMDO75829 334 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-204ENST00000436439 GABPAQ06546 454 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 SLFNL1Q499Z3 407 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-204ENST00000436439 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 IL17RAQ96F46 866 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 ANO2Q9NQ90 1003 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-204ENST00000436439 RPTORQ8N122 1335 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
HMGCL-204ENST00000436439 LAMA4Q16363 1823 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 A0A0G2JMZ2 1700 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 CCL14Q16627 93 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 GPR142Q7Z601 462 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 LCORLQ8N3X6 602 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 SDR42E1Q8WUS8 393 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 USP6NLQ92738 828 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 FEZ1Q99689 392 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
HMGCL-204ENST00000436439 SZT2Q5T011 3432 aa13□□□□□ -0.33
HMGCL-204ENST00000436439 CHGBP05060 677 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
HMGCL-204ENST00000436439 CYP2D6P10635 497 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 VCAM1P19320 739 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 MAPK4P31152 587 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 ANAPC15P60006 121 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 MORN1Q5T089 497 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 CATSPERGQ6ZRH7 1159 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
HMGCL-204ENST00000436439 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
HMGCL-204ENST00000436439 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 A0A1W2PRG0 241 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 SMIM22K7EJ46 135 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 EVI5O60447 810 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 CAPN2P17655 700 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 MCCP23508 829 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 HSPA4P34932 840 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 SEPT2Q15019 361 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 DSCC1Q9BVC3 393 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 CABP5Q9NP86 173 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-204ENST00000436439 MCM9Q9NXL9 1143 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 BTBD7Q9P203 1132 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
HMGCL-204ENST00000436439 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
HMGCL-204ENST00000436439 M0R2C6 588 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 PRKAB2O43741 272 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 USP14P54578 494 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 PTH1RQ03431 593 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 ANKLE1Q8NAG6 615 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 KCNB2Q92953 911 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 KIF2CQ99661 725 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 PUS7LQ9H0K6 701 aaKnown RBP12.97□□□□□ -0.33
HMGCL-204ENST00000436439 RPAP3Q9H6T3 665 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-204ENST00000436439 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
HMGCL-204ENST00000436439 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
HMGCL-204ENST00000436439 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
HMGCL-204ENST00000436439 CCND3P30281 292 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms