RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 CERKLQ49MI3 558 aaPredicted RBP18.37■□□□□ 0.53
NELFE-204ENST00000436289 TTC6Q86TZ1 520 aa18.37■□□□□ 0.53
NELFE-204ENST00000436289 ADAMTS19Q8TE59 1207 aa18.37■□□□□ 0.53
NELFE-204ENST00000436289 MOV10L1Q9BXT6 1211 aaKnown RBP18.37■□□□□ 0.53
NELFE-204ENST00000436289 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
NELFE-204ENST00000436289 RPAP3Q9H6T3 665 aaPredicted RBP18.37■□□□□ 0.53
NELFE-204ENST00000436289 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
NELFE-204ENST00000436289 DCDC2CA8MYV0 355 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 GNAI3P08754 354 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 ITGB8P26012 769 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 EPHB4P54760 987 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 ANKRD33Q7Z3H0 272 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 UHRF1Q96T88 793 aaPredicted RBP18.36■□□□□ 0.53
NELFE-204ENST00000436289 TSEN34Q9BSV6 310 aaKnown RBP18.36■□□□□ 0.53
NELFE-204ENST00000436289 SPATC1LQ9H0A9 340 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 TSPYL2Q9H2G4 693 aaPredicted RBP18.36■□□□□ 0.53
NELFE-204ENST00000436289 XPNPEP3Q9NQH7 507 aa18.36■□□□□ 0.53
NELFE-204ENST00000436289 ERCC3P19447 782 aa18.35■□□□□ 0.53
NELFE-204ENST00000436289 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
NELFE-204ENST00000436289 CCDC158Q5M9N0 1113 aa18.35■□□□□ 0.53
NELFE-204ENST00000436289 TMED8Q6PL24 325 aaPredicted RBP18.35■□□□□ 0.53
NELFE-204ENST00000436289 SLC44A5Q8NCS7 719 aa18.35■□□□□ 0.53
NELFE-204ENST00000436289 NUP133Q8WUM0 1156 aa18.35■□□□□ 0.53
NELFE-204ENST00000436289 SMC4Q9NTJ3 1288 aa18.35■□□□□ 0.53
NELFE-204ENST00000436289 PQBP1O60828 265 aaKnown RBP18.34■□□□□ 0.53
NELFE-204ENST00000436289 COBLO75128 1261 aa18.34■□□□□ 0.53
NELFE-204ENST00000436289 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.538e-8■■■□□ 18.4
NELFE-204ENST00000436289 FAM47AQ5JRC9 791 aa18.34■□□□□ 0.53
NELFE-204ENST00000436289 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
NELFE-204ENST00000436289 SIPA1L1O43166 1804 aa18.34■□□□□ 0.53
NELFE-204ENST00000436289 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.53
NELFE-204ENST00000436289 TIMP1P01033 207 aa18.33■□□□□ 0.52
NELFE-204ENST00000436289 FCER1AP12319 257 aa18.33■□□□□ 0.52
NELFE-204ENST00000436289 PPIGQ13427 754 aaKnown RBP eCLIP18.33■□□□□ 0.521e-7■■■■□ 23.1
NELFE-204ENST00000436289 ACER1Q8TDN7 264 aa18.33■□□□□ 0.52
NELFE-204ENST00000436289 MAML3Q96JK9 1138 aa18.33■□□□□ 0.52
NELFE-204ENST00000436289 RAPGEFL1Q9UHV5 662 aa18.33■□□□□ 0.52
NELFE-204ENST00000436289 DIS3Q9Y2L1 958 aaKnown RBP18.33■□□□□ 0.52
NELFE-204ENST00000436289 A0A1W2PQ45 241 aaPredicted RBP18.32■□□□□ 0.52
NELFE-204ENST00000436289 A0A1W2PQY0 241 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 SLC25A27O95847 323 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
NELFE-204ENST00000436289 USP5P45974 858 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 MFSD5Q6N075 450 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 PPM1EQ8WY54 764 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
NELFE-204ENST00000436289 MYO9BQ13459 2157 aa18.32■□□□□ 0.52
NELFE-204ENST00000436289 MROH7Q68CQ1 1323 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 ANP32CO43423 234 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 FAAP100Q0VG06 881 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 RAB30Q15771 203 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 AAK1Q2M2I8 961 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 ADGRA1Q86SQ6 560 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 MEIS3Q99687 375 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 GPR108Q9NPR9 543 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
NELFE-204ENST00000436289 MOXD2PA6NHM9 499 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 AKR1A1P14550 325 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 NCAPG2Q86XI2 1143 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.3■□□□□ 0.522e-7■■■□□ 14.9
NELFE-204ENST00000436289 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 PRDM12Q9H4Q4 367 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 STARD7Q9NQZ5 370 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
NELFE-204ENST00000436289 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
NELFE-204ENST00000436289 SYNGAP1Q96PV0 1343 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 CYP2E1P05181 493 aaPredicted RBP18.29■□□□□ 0.52
NELFE-204ENST00000436289 CYP7A1P22680 504 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 DSG3P32926 999 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 RASIP1Q5U651 963 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 TMEM199Q8N511 208 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 TINF2Q9BSI4 451 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
NELFE-204ENST00000436289 SNRKQ9NRH2 765 aa18.29■□□□□ 0.52
NELFE-204ENST00000436289 CXXC1Q9P0U4 656 aaPredicted RBP18.29■□□□□ 0.52
NELFE-204ENST00000436289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.29■□□□□ 0.52
NELFE-204ENST00000436289 ELP1O95163 1332 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 PGK1P00558 417 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 ACLYP53396 1101 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 PLS1Q14651 629 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 PSRC1Q6PGN9 363 aaPredicted RBP18.28■□□□□ 0.52
NELFE-204ENST00000436289 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
NELFE-204ENST00000436289 TBX21Q9UL17 535 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 HCN4Q9Y3Q4 1203 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
NELFE-204ENST00000436289 COPB2P35606 906 aa18.27■□□□□ 0.52
NELFE-204ENST00000436289 DYNLL1P63167 89 aaKnown RBP18.27■□□□□ 0.52
NELFE-204ENST00000436289 SLFN5Q08AF3 891 aa18.27■□□□□ 0.52
NELFE-204ENST00000436289 TMEM240Q5SV17 173 aa18.27■□□□□ 0.52
NELFE-204ENST00000436289 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.52
NELFE-204ENST00000436289 SMCHD1A6NHR9 2005 aa18.27■□□□□ 0.51
NELFE-204ENST00000436289 IGFBP4P22692 258 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms