RNA–Protein interactions for RNA: ENST00000435345.6

SCP2-207, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-207ENST00000435345 KCNMA1Q12791 1236 aa9.46□□□□□ -0.9
SCP2-207ENST00000435345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.46□□□□□ -0.96e-6■■■■■ 48.1
SCP2-207ENST00000435345 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
SCP2-207ENST00000435345 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.9
SCP2-207ENST00000435345 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
SCP2-207ENST00000435345 RTL9Q8NET4 1388 aa9.46□□□□□ -0.9
SCP2-207ENST00000435345 CEMIPQ8WUJ3 1361 aa9.46□□□□□ -0.9
SCP2-207ENST00000435345 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
SCP2-207ENST00000435345 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
SCP2-207ENST00000435345 SNRPA1P09661 255 aaKnown RBP9.45□□□□□ -0.9
SCP2-207ENST00000435345 ANGEL2Q5VTE6 544 aaKnown RBP9.45□□□□□ -0.9
SCP2-207ENST00000435345 SUSD4Q5VX71 490 aa9.45□□□□□ -0.9
SCP2-207ENST00000435345 SCARF2Q96GP6 870 aaPredicted RBP9.45□□□□□ -0.9
SCP2-207ENST00000435345 DBNDD1Q9H9R9 158 aa9.45□□□□□ -0.9
SCP2-207ENST00000435345 PTPN22Q9Y2R2 807 aa9.45□□□□□ -0.9
SCP2-207ENST00000435345 NUP98P52948 1817 aa9.45□□□□□ -0.9
SCP2-207ENST00000435345 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
SCP2-207ENST00000435345 SPEM2Q0P670 501 aa9.44□□□□□ -0.9
SCP2-207ENST00000435345 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
SCP2-207ENST00000435345 SYT9Q86SS6 491 aa9.44□□□□□ -0.9
SCP2-207ENST00000435345 ZNF333Q96JL9 665 aa9.44□□□□□ -0.9
SCP2-207ENST00000435345 MAP3K15Q6ZN16 1313 aa9.44□□□□□ -0.9
SCP2-207ENST00000435345 LAMB2P55268 1798 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 COX20Q5RI15 118 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 CD99L2Q8TCZ2 262 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 MDFIQ99750 246 aa9.43□□□□□ -0.9
SCP2-207ENST00000435345 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
SCP2-207ENST00000435345 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 SOX1O00570 391 aaPredicted RBP9.42□□□□□ -0.9
SCP2-207ENST00000435345 ECE2O60344 883 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
SCP2-207ENST00000435345 GRNP28799 593 aaKnown RBP9.42□□□□□ -0.9
SCP2-207ENST00000435345 SLC4A8Q2Y0W8 1093 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 KIF6Q6ZMV9 814 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 CAPN12Q6ZSI9 719 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 TTLL7Q6ZT98 887 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 SP8Q8IXZ3 490 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 ERO1AQ96HE7 468 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 PRO3102Q9H379 93 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 VCANP13611 3396 aa9.42□□□□□ -0.9
SCP2-207ENST00000435345 SIN3BO75182 1162 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 INPP5BP32019 993 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 IRS1P35568 1242 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 IDH3AP50213 366 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 SNRPNP63162 240 aaKnown RBP9.41□□□□□ -0.9
SCP2-207ENST00000435345 PRAMEF18Q5VWM3 479 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
SCP2-207ENST00000435345 SAP130Q9H0E3 1048 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 PANK3Q9H999 370 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 EFCC1Q9HA90 598 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
SCP2-207ENST00000435345 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
SCP2-207ENST00000435345 BBOX1O75936 387 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 MICAL2O94851 1124 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 AMPD1P23109 780 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
SCP2-207ENST00000435345 CAP1Q01518 475 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 TCIRG1Q13488 830 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 GRAPQ13588 217 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 SLC9C1Q4G0N8 1177 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 C16orf46Q6P387 395 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 BEND7Q8N7W2 519 aaPredicted RBP9.4□□□□□ -0.9
SCP2-207ENST00000435345 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
SCP2-207ENST00000435345 IFT43Q96FT9 208 aa9.4□□□□□ -0.9
SCP2-207ENST00000435345 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.91
SCP2-207ENST00000435345 ANKRD36CQ5JPF3 1778 aa9.4□□□□□ -0.91
SCP2-207ENST00000435345 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.91
SCP2-207ENST00000435345 DIAPH1O60610 1272 aaKnown RBP9.39□□□□□ -0.91
SCP2-207ENST00000435345 PTPN12Q05209 780 aaKnown RBP9.39□□□□□ -0.91
SCP2-207ENST00000435345 PPP1R42Q7Z4L9 355 aa9.39□□□□□ -0.91
SCP2-207ENST00000435345 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
SCP2-207ENST00000435345 ZNF34Q8IZ26 560 aa9.39□□□□□ -0.91
SCP2-207ENST00000435345 DPF3Q92784 378 aa9.39□□□□□ -0.91
SCP2-207ENST00000435345 TNFRSF25Q93038 417 aa9.39□□□□□ -0.91
SCP2-207ENST00000435345 PTCH2Q9Y6C5 1203 aa9.39□□□□□ -0.91
SCP2-207ENST00000435345 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
SCP2-207ENST00000435345 ELOA3DA6NLF2 546 aaPredicted RBP9.38□□□□□ -0.91
SCP2-207ENST00000435345 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 ARSDP51689 593 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 CRHR2Q13324 411 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 PRKG1Q13976 671 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 ELOA3BQ3SY89 546 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 PARP10Q53GL7 1025 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 DDX46Q7L014 1031 aaKnown RBP9.38□□□□□ -0.91
SCP2-207ENST00000435345 ELOA3Q8NG57 546 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 SHISA4Q96DD7 197 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 GSX2Q9BZM3 304 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 COL4A1P02462 1669 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 TAF1P21675 1872 aa9.38□□□□□ -0.91
SCP2-207ENST00000435345 LAMB1P07942 1786 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms