RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 PHF20Q9BVI0 1012 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 RTFDC1Q9BY42 306 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 XPO4Q9C0E2 1151 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 NAT10Q9H0A0 1025 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 FOXP1Q9H334 677 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 LEMD3Q9Y2U8 911 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 PCDHA5Q9Y5H7 936 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 PRPF3O43395 683 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 TSPY3P0CV98 308 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 TSPY8P0CW00 308 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 BMP6P22004 513 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 AFMP43652 599 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 EIF6P56537 245 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 GTF2IP78347 998 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 NPY5RQ15761 445 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 TXNRD1Q16881 649 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 C12orf60Q5U649 245 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 SPTY2D1Q68D10 685 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 TEX11Q8IYF3 940 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 TBC1D16Q8TBP0 767 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 WDR66Q8TBY9 1149 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 DHX58Q96C10 678 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 RBM17Q96I25 401 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 CCDC94Q9BW85 323 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 KAT14Q9H8E8 782 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 MYH1P12882 1939 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 ANKRD31Q8N7Z5 1873 aa7.97□□□□□ -1.13
GAPVD1-208ENST00000431329 DDX60LQ5H9U9 1706 aaKnown RBP7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 FAM205AQ6ZU69 1335 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 VWA3AA6NCI4 1184 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 CTIFO43310 598 aaKnown RBP7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 ORC4O43929 436 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 FGRP09769 529 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 CDC25AP30304 524 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 MCM7P33993 719 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 SCNN1DP51172 638 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 NLRP5P59047 1200 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 NCAPHQ15003 741 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 SLC35G1Q2M3R5 365 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 RILPL1Q5EBL4 403 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 TMC6Q7Z403 805 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 CERS3Q8IU89 383 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 DPF2Q92785 391 aa7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 NOL10Q9BSC4 688 aaKnown RBP7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.13
GAPVD1-208ENST00000431329 TRIM75PA6NK02 468 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 DDAH1O94760 285 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 PTPREP23469 700 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 CBX1P83916 185 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 CCZ1BP86790 482 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 CCZ1P86791 482 aaPredicted RBP7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 CRY2Q49AN0 593 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 CEP135Q66GS9 1140 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 HOMER1Q86YM7 354 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 SMYD4Q8IYR2 804 aaPredicted RBP7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 CNPY4Q8N129 248 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 PDCL2Q8N4E4 241 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 HSD3B7Q9H2F3 369 aa7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 RBM28Q9NW13 759 aaKnown RBP7.96□□□□□ -1.14
GAPVD1-208ENST00000431329 PDS5AQ29RF7 1337 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 SPDYE4A6NLX3 237 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 SMTNL1A8MU46 457 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 PPEF1O14829 653 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 SCG2P13521 617 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 XBP1P17861 261 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 RBM6P78332 1123 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 SBK1Q52WX2 424 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 CCDC112Q8NEF3 446 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 SYMPKQ92797 1274 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 VAT1LQ9HCJ6 419 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 PCDHAC2Q9Y5I4 1007 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 FLT1P17948 1338 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 TMEM232C9JQI7 657 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 RGL2O15211 777 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 BAG3O95817 575 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 RASA1P20936 1047 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 NCBP1Q09161 790 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 POSTNQ15063 836 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 PTPN14Q15678 1187 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 TTC38Q5R3I4 469 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 HEATR3Q7Z4Q2 680 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 COL23A1Q86Y22 540 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 ZNF444Q8N0Y2 327 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 ANKRD7Q92527 254 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 MAN1B1Q9UKM7 699 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 SNED1Q8TER0 1413 aa7.95□□□□□ -1.14
GAPVD1-208ENST00000431329 ACTN4O43707 911 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 CYTH3O43739 400 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 NEMFO60524 1076 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 CLSTN1O94985 981 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 CALM1P0DP23 149 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 CALM2P0DP24 149 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 CALM3P0DP25 149 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 ATP2B4P23634 1241 aa7.94□□□□□ -1.14
GAPVD1-208ENST00000431329 CDK8P49336 464 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms