RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.25□□□□□ -1.09
PTPN4-204ENST00000431283 GAB4Q2WGN9 574 aa8.25□□□□□ -1.09
PTPN4-204ENST00000431283 SYDE1Q6ZW31 735 aaPredicted RBP8.25□□□□□ -1.09
PTPN4-204ENST00000431283 HS2ST1Q7LGA3 356 aa8.25□□□□□ -1.09
PTPN4-204ENST00000431283 FBXO15Q8NCQ5 510 aaPredicted RBP8.25□□□□□ -1.09
PTPN4-204ENST00000431283 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
PTPN4-204ENST00000431283 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
PTPN4-204ENST00000431283 KIF2CQ99661 725 aa8.25□□□□□ -1.09
PTPN4-204ENST00000431283 LRRN2O75325 713 aa8.24□□□□□ -1.09
PTPN4-204ENST00000431283 RAG1P15918 1043 aa8.24□□□□□ -1.09
PTPN4-204ENST00000431283 EIF4A3P38919 411 aaKnown RBP8.24□□□□□ -1.09
PTPN4-204ENST00000431283 RNF4P78317 190 aa8.24□□□□□ -1.09
PTPN4-204ENST00000431283 TOX2Q96NM4 488 aa8.24□□□□□ -1.09
PTPN4-204ENST00000431283 EPB41L4BQ9H329 900 aa8.24□□□□□ -1.09
PTPN4-204ENST00000431283 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
PTPN4-204ENST00000431283 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
PTPN4-204ENST00000431283 NFIBO00712 420 aa8.23□□□□□ -1.09
PTPN4-204ENST00000431283 SRFP11831 508 aa8.23□□□□□ -1.09
PTPN4-204ENST00000431283 ERMP1Q7Z2K6 904 aa8.23□□□□□ -1.09
PTPN4-204ENST00000431283 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
PTPN4-204ENST00000431283 PDZD8Q8NEN9 1154 aa8.23□□□□□ -1.09
PTPN4-204ENST00000431283 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
PTPN4-204ENST00000431283 TSPAN15O95858 294 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 HPXP02790 462 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 ERVFC1P60507 584 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 DUSP4Q13115 394 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 ARSHQ5FYA8 562 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 FBXL19Q6PCT2 694 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 SPPL2CQ8IUH8 684 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 GMIPQ9P107 970 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 PCDHB14Q9Y5E9 798 aa8.22□□□□□ -1.09
PTPN4-204ENST00000431283 FITM1A5D6W6 292 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 RBAK-RBAKDNI3L0D1 243 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 RGS13O14921 159 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 TMEM253P0C7T8 217 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 LILRA2Q8N149 483 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.1
PTPN4-204ENST00000431283 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.1
PTPN4-204ENST00000431283 LRRC3Q9BY71 257 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTPN4-204ENST00000431283 BRMS1Q9HCU9 246 aa8.21□□□□□ -1.1
PTPN4-204ENST00000431283 SSU72P8A0A1W2PR75 194 aa8.2□□□□□ -1.1
PTPN4-204ENST00000431283 GARTP22102 1010 aa8.2□□□□□ -1.1
PTPN4-204ENST00000431283 CHRNEQ04844 493 aa8.2□□□□□ -1.1
PTPN4-204ENST00000431283 RAD51AP2Q09MP3 1159 aa8.2□□□□□ -1.1
PTPN4-204ENST00000431283 ENOX1Q8TC92 643 aaKnown RBP8.2□□□□□ -1.1
PTPN4-204ENST00000431283 RBM47A0AV96 593 aaKnown RBP8.19□□□□□ -1.1
PTPN4-204ENST00000431283 SLC22A31A6NKX4 558 aa8.19□□□□□ -1.1
PTPN4-204ENST00000431283 ZGLP1P0C6A0 271 aa8.19□□□□□ -1.1
PTPN4-204ENST00000431283 MCM4P33991 863 aa8.19□□□□□ -1.1
PTPN4-204ENST00000431283 TRHRP34981 398 aaPredicted RBP8.19□□□□□ -1.1
PTPN4-204ENST00000431283 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
PTPN4-204ENST00000431283 NMIQ13287 307 aaPredicted RBP8.19□□□□□ -1.1
PTPN4-204ENST00000431283 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
PTPN4-204ENST00000431283 DNAJA2O60884 412 aa8.18□□□□□ -1.1
PTPN4-204ENST00000431283 SEZ6Q53EL9 994 aa8.18□□□□□ -1.1
PTPN4-204ENST00000431283 RNF32Q9H0A6 362 aa8.18□□□□□ -1.1
PTPN4-204ENST00000431283 SLC6A17Q9H1V8 727 aa8.18□□□□□ -1.1
PTPN4-204ENST00000431283 KCNQ5Q9NR82 932 aa8.18□□□□□ -1.1
PTPN4-204ENST00000431283 GREM1O60565 184 aa8.17□□□□□ -1.1
PTPN4-204ENST00000431283 ZNF165P49910 485 aa8.17□□□□□ -1.1
PTPN4-204ENST00000431283 KRTAP19-4Q3LI73 84 aa8.17□□□□□ -1.1
PTPN4-204ENST00000431283 GK5Q6ZS86 529 aa8.17□□□□□ -1.1
PTPN4-204ENST00000431283 ANKS4BQ8N8V4 417 aa8.17□□□□□ -1.1
PTPN4-204ENST00000431283 SLC26A8Q96RN1 970 aa8.17□□□□□ -1.1
PTPN4-204ENST00000431283 CWC22Q9HCG8 908 aaKnown RBP8.17□□□□□ -1.1
PTPN4-204ENST00000431283 KRTAP4-8A0A0G2JLE6 195 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 TCAF2A6NFQ2 919 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 CLEC3AO75596 197 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 ATE1O95260 518 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 RPL10P27635 214 aaKnown RBP8.16□□□□□ -1.1
PTPN4-204ENST00000431283 LRRFIP1Q32MZ4 808 aaKnown RBP8.16□□□□□ -1.1
PTPN4-204ENST00000431283 OVOS1Q6IE37 1185 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 TMEM87AQ8NBN3 555 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 SYTL5Q8TDW5 730 aaPredicted RBP8.16□□□□□ -1.1
PTPN4-204ENST00000431283 KCNN1Q92952 543 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 GPR160Q9UJ42 338 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 ZMYM5Q9UJ78 669 aa8.16□□□□□ -1.1
PTPN4-204ENST00000431283 ZBTB7CA1YPR0 619 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 UBOX5O94941 541 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 C1QTNF9P0C862 333 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 PDE6BP35913 854 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 PCBP3P57721 371 aaKnown RBP8.15□□□□□ -1.1
PTPN4-204ENST00000431283 TEKQ02763 1124 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 MRPL58Q14197 206 aaKnown RBP8.15□□□□□ -1.1
PTPN4-204ENST00000431283 NR0B2Q15466 257 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 LRRC56Q8IYG6 542 aaPredicted RBP8.15□□□□□ -1.1
PTPN4-204ENST00000431283 EHMT1Q9H9B1 1298 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
PTPN4-204ENST00000431283 CRKP46108 304 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 SNX17Q15036 470 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 SLC14A2Q15849 920 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 CDCP2Q5VXM1 449 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 NLRC3Q7RTR2 1065 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 WAPLQ7Z5K2 1190 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 IRF2BP1Q8IU81 584 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 REXO1Q8N1G1 1221 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms