RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KRT2P35908 639 aa19.2■□□□□ 0.66
USHBP1-203ENST00000431146 EIF6P56537 245 aaKnown RBP19.2■□□□□ 0.66
USHBP1-203ENST00000431146 CC2D2BQ6DHV5 1058 aa19.2■□□□□ 0.66
USHBP1-203ENST00000431146 PPP1R9BQ96SB3 815 aa19.2■□□□□ 0.66
USHBP1-203ENST00000431146 SERPINB13Q9UIV8 391 aa19.2■□□□□ 0.66
USHBP1-203ENST00000431146 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
USHBP1-203ENST00000431146 ADAMTS3O15072 1205 aa19.19■□□□□ 0.66
USHBP1-203ENST00000431146 NPY5RQ15761 445 aa19.19■□□□□ 0.66
USHBP1-203ENST00000431146 GPKOWQ92917 476 aaPredicted RBP eCLIP19.19■□□□□ 0.66
USHBP1-203ENST00000431146 ZNF277Q9NRM2 450 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-203ENST00000431146 PFKFB3Q16875 520 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-203ENST00000431146 CCDC93Q567U6 631 aa19.19■□□□□ 0.66
USHBP1-203ENST00000431146 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
USHBP1-203ENST00000431146 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-203ENST00000431146 A0A087WWV3 80 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 FAM196BA6NMK8 535 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 CYTH3O43739 400 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 PPP6R2O75170 966 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 PFKFB1P16118 471 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 FKBP1AP62942 108 aaKnown RBP19.18■□□□□ 0.66
USHBP1-203ENST00000431146 USP17L2Q6R6M4 530 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 ANO6Q4KMQ2 910 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 RILPL1Q5EBL4 403 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 SHC4Q6S5L8 630 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 SASS6Q6UVJ0 657 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 SLC16A10Q8TF71 515 aa19.18■□□□□ 0.66
USHBP1-203ENST00000431146 CMA1P23946 247 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 SHMT1P34896 483 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 NLRP5P59047 1200 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 SPECC1Q5M775 1068 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 FAM198AQ9UFP1 575 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 USP25Q9UHP3 1055 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 COL4A5P29400 1685 aa19.17■□□□□ 0.66
USHBP1-203ENST00000431146 PALM3A6NDB9 673 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 DDTLA6NHG4 134 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 WNT7AO00755 349 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 RAD17O75943 681 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 TOP1P11387 765 aaKnown RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 GRIN1Q05586 938 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 LRRC47Q8N1G4 583 aaKnown RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 JMYQ8N9B5 988 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 TDRD3Q9H7E2 651 aaKnown RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 SIPA1L1O43166 1804 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 KLRF2D3W0D1 207 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 ZNF202O95125 648 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 HLA-DOAP06340 250 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 RTKN2Q8IZC4 609 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 LARGE2Q8N3Y3 721 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 TRIM44Q96DX7 344 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 SDF4Q9BRK5 362 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.16■□□□□ 0.66
USHBP1-203ENST00000431146 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 SERPINA10Q9UK55 444 aa19.16■□□□□ 0.66
USHBP1-203ENST00000431146 USP17L5A8MUK1 530 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 MPHOSPH10O00566 681 aaKnown RBP19.15■□□□□ 0.66
USHBP1-203ENST00000431146 TYW1BQ6NUM6 668 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 ZSCAN29Q8IWY8 852 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-203ENST00000431146 TNFRSF25Q93038 417 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 PDLIM2Q96JY6 352 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 MRIQ9BWK5 157 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 DNAJC25Q9H1X3 360 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 DNAJC18Q9H819 358 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 BRMS1Q9HCU9 246 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 PARP1P09874 1014 aaKnown RBP19.15■□□□□ 0.66
USHBP1-203ENST00000431146 GNAQP50148 359 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 HDLBPQ00341 1268 aaKnown RBP19.15■□□□□ 0.66
USHBP1-203ENST00000431146 PLCB2Q00722 1185 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-203ENST00000431146 CFAP100Q494V2 611 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 SH3BP5LQ7L8J4 393 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 LUZP1Q86V48 1076 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 SWAP70Q9UH65 585 aa19.15■□□□□ 0.66
USHBP1-203ENST00000431146 KIF13BQ9NQT8 1826 aa19.14■□□□□ 0.66
USHBP1-203ENST00000431146 CTAGE5O15320 804 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 UVSSAQ2YD98 709 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 HEATR3Q7Z4Q2 680 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 KLHL34Q8N239 644 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
USHBP1-203ENST00000431146 PRMT6Q96LA8 375 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-203ENST00000431146 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-203ENST00000431146 CLIP2Q9UDT6 1046 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 PSME4Q14997 1843 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 FRMPD2Q68DX3 1309 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-203ENST00000431146 PLIN4Q96Q06 1357 aa19.14■□□□□ 0.65
USHBP1-203ENST00000431146 PSMD14O00487 310 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 CUTAO60888 179 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 NOVP48745 357 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 RESP18Q5W5W9 173 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 WWC2Q6AWC2 1192 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 PIK3AP1Q6ZUJ8 805 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 HOMER1Q86YM7 354 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 FAM200AQ8TCP9 573 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 PSMD1Q99460 953 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 VAT1LQ9HCJ6 419 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 ZBTB12Q9Y330 459 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-203ENST00000431146 MYH4Q9Y623 1939 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 IGKV6D-41A0A0C4DH26 115 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 SYKP43405 635 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 RASGRP4Q8TDF6 673 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms