RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
OPTN-208ENST00000430081 TTYH1Q9H313 450 aaPredicted RBP12.49□□□□□ -0.41
OPTN-208ENST00000430081 MROH8Q9H579 483 aa12.49□□□□□ -0.41
OPTN-208ENST00000430081 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
OPTN-208ENST00000430081 TACC3Q9Y6A5 838 aa12.49□□□□□ -0.41
OPTN-208ENST00000430081 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 TRIM43BA6NCK2 446 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 COBLO75128 1261 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 SHMT1P34896 483 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 PLCD1P51178 756 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 TLE2Q04725 743 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 POLA2Q14181 598 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 C1orf53Q5VUE5 145 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 RNF180Q86T96 592 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 ABRAQ8N0Z2 381 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
OPTN-208ENST00000430081 TRIM43Q96BQ3 446 aaPredicted RBP12.48□□□□□ -0.41
OPTN-208ENST00000430081 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
OPTN-208ENST00000430081 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
OPTN-208ENST00000430081 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 CCER2I3L3R5 266 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 BCAR3O75815 825 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 RARBP10826 455 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 FCER1AP12319 257 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 RAG1P15918 1043 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 DSG3P32926 999 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 SSH3Q8TE77 659 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 XPNPEP3Q9NQH7 507 aa12.47□□□□□ -0.41
OPTN-208ENST00000430081 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 A0A1W2PRG0 241 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 FLOT1O75955 427 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 SLC25A27O95847 323 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 CLTBP09497 229 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 FAM47AQ5JRC9 791 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
OPTN-208ENST00000430081 MAML3Q96JK9 1138 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 CRNKL1Q9BZJ0 848 aaKnown RBP12.46□□□□□ -0.41
OPTN-208ENST00000430081 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 TLR7Q9NYK1 1049 aaKnown RBP12.46□□□□□ -0.41
OPTN-208ENST00000430081 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
OPTN-208ENST00000430081 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
OPTN-208ENST00000430081 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
OPTN-208ENST00000430081 PQBP1O60828 265 aaKnown RBP12.45□□□□□ -0.42
OPTN-208ENST00000430081 FPGSQ05932 587 aa12.45□□□□□ -0.42
OPTN-208ENST00000430081 GABPAQ06546 454 aa12.45□□□□□ -0.42
OPTN-208ENST00000430081 TMEM179Q6ZVK1 233 aa12.45□□□□□ -0.42
OPTN-208ENST00000430081 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
OPTN-208ENST00000430081 EAF2Q96CJ1 260 aaPredicted RBP12.45□□□□□ -0.42
OPTN-208ENST00000430081 MMP19Q99542 508 aa12.45□□□□□ -0.42
OPTN-208ENST00000430081 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
OPTN-208ENST00000430081 NOP58Q9Y2X3 529 aaKnown RBP12.45□□□□□ -0.42
OPTN-208ENST00000430081 MAST2Q6P0Q8 1798 aa12.44□□□□□ -0.42
OPTN-208ENST00000430081 KIAA0355O15063 1070 aa12.44□□□□□ -0.42
OPTN-208ENST00000430081 KCTD2Q14681 263 aa12.44□□□□□ -0.42
OPTN-208ENST00000430081 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
OPTN-208ENST00000430081 TJAP1Q5JTD0 557 aa12.44□□□□□ -0.42
OPTN-208ENST00000430081 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
OPTN-208ENST00000430081 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
OPTN-208ENST00000430081 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
OPTN-208ENST00000430081 DCDC2CA8MYV0 355 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 PGK1P00558 417 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 ITGB8P26012 769 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 EPHB4P54760 987 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 ZKSCAN2Q63HK3 967 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 SPICE1Q8N0Z3 855 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 TINF2Q9BSI4 451 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 TMX2Q9Y320 296 aa12.43□□□□□ -0.42
OPTN-208ENST00000430081 A0A1W2PQ45 241 aaPredicted RBP12.42□□□□□ -0.42
OPTN-208ENST00000430081 A0A1W2PQY0 241 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 WDR46O15213 610 aaKnown RBP12.42□□□□□ -0.42
OPTN-208ENST00000430081 AKR1A1P14550 325 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 DNAJB2P25686 324 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 ICA1Q05084 483 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 TMEM132BQ14DG7 1078 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 KIAA1755Q5JYT7 1200 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 SLC9C2Q5TAH2 1124 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 AACSQ86V21 672 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 SLC44A5Q8NCS7 719 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 NUP133Q8WUM0 1156 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 TIFAQ96CG3 184 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
OPTN-208ENST00000430081 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 STARD7Q9NQZ5 370 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 CNPY2Q9Y2B0 182 aa12.42□□□□□ -0.42
OPTN-208ENST00000430081 DIS3Q9Y2L1 958 aaKnown RBP12.42□□□□□ -0.42
OPTN-208ENST00000430081 VCANP13611 3396 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms