RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ICA1Q05084 483 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 MAP2K5Q13163 448 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 MAP3K21Q5TCX8 1036 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 ZSCAN25Q6NSZ9 544 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 LBX2Q6XYB7 198 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 NECAB2Q7Z6G3 386 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 TRMT44Q8IYL2 757 aaKnown RBP20.56■□□□□ 0.88
TRIM39-209ENST00000428728 PUS7LQ9H0K6 701 aaKnown RBP20.56■□□□□ 0.88
TRIM39-209ENST00000428728 ECHDC1Q9NTX5 307 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 PCDH10Q9P2E7 1040 aa20.56■□□□□ 0.88
TRIM39-209ENST00000428728 GLRX3O76003 335 aaKnown RBP20.55■□□□□ 0.88
TRIM39-209ENST00000428728 CACNB2Q08289 660 aaPredicted RBP20.55■□□□□ 0.88
TRIM39-209ENST00000428728 C12orf60Q5U649 245 aa20.55■□□□□ 0.88
TRIM39-209ENST00000428728 ANKLE1Q8NAG6 615 aa20.55■□□□□ 0.88
TRIM39-209ENST00000428728 ARHGEF10LQ9HCE6 1279 aa20.55■□□□□ 0.88
TRIM39-209ENST00000428728 IVNS1ABPQ9Y6Y0 642 aa20.55■□□□□ 0.88
TRIM39-209ENST00000428728 PLXNA1Q9UIW2 1896 aa20.55■□□□□ 0.88
TRIM39-209ENST00000428728 CCND3P30281 292 aaPredicted RBP20.54■□□□□ 0.88
TRIM39-209ENST00000428728 CDK8P49336 464 aa20.54■□□□□ 0.88
TRIM39-209ENST00000428728 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
TRIM39-209ENST00000428728 GPATCH3Q96I76 525 aa20.54■□□□□ 0.88
TRIM39-209ENST00000428728 RBM27Q9P2N5 1060 aaKnown RBP20.54■□□□□ 0.88
TRIM39-209ENST00000428728 SLC15A5A6NIM6 579 aa20.53■□□□□ 0.88
TRIM39-209ENST00000428728 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
TRIM39-209ENST00000428728 C16orf86Q6ZW13 317 aa20.53■□□□□ 0.88
TRIM39-209ENST00000428728 SPICE1Q8N0Z3 855 aa20.53■□□□□ 0.88
TRIM39-209ENST00000428728 DCTPP1Q9H773 170 aa20.53■□□□□ 0.88
TRIM39-209ENST00000428728 PTPREP23469 700 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 COG2Q14746 738 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 CTR9Q6PD62 1173 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 C7orf61Q8IZ16 206 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 CCDC17Q96LX7 622 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 NBPF3Q9H094 633 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 FLRT1Q9NZU1 646 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 OGDHLQ9ULD0 1010 aa20.52■□□□□ 0.88
TRIM39-209ENST00000428728 FLOT1O75955 427 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 MNX1P50219 401 aaPredicted RBP20.51■□□□□ 0.87
TRIM39-209ENST00000428728 GRB14Q14449 540 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 SIAH1Q8IUQ4 282 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 KBTBD3Q8NAB2 608 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 LPAR1Q92633 364 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 C11orf49Q9H6J7 331 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 VCPKMTQ9H867 229 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 ARPP21Q9UBL0 812 aaPredicted RBP20.51■□□□□ 0.87
TRIM39-209ENST00000428728 TMX2Q9Y320 296 aa20.51■□□□□ 0.87
TRIM39-209ENST00000428728 PLS1Q14651 629 aa20.5■□□□□ 0.87
TRIM39-209ENST00000428728 MFSD14CQ5VZR4 134 aa20.5■□□□□ 0.87
TRIM39-209ENST00000428728 NPLOC4Q8TAT6 608 aa20.5■□□□□ 0.87
TRIM39-209ENST00000428728 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
TRIM39-209ENST00000428728 MOV10L1Q9BXT6 1211 aaKnown RBP20.5■□□□□ 0.87
TRIM39-209ENST00000428728 SPATC1LQ9H0A9 340 aa20.5■□□□□ 0.87
TRIM39-209ENST00000428728 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
TRIM39-209ENST00000428728 EEF2P13639 858 aaKnown RBP20.49■□□□□ 0.87
TRIM39-209ENST00000428728 APPBP2Q92624 585 aa20.49■□□□□ 0.87
TRIM39-209ENST00000428728 OSBP2Q969R2 916 aa20.49■□□□□ 0.87
TRIM39-209ENST00000428728 STRBPQ96SI9 672 aaKnown RBP20.49■□□□□ 0.87
TRIM39-209ENST00000428728 PFASO15067 1338 aa20.49■□□□□ 0.87
TRIM39-209ENST00000428728 WDR46O15213 610 aaKnown RBP20.48■□□□□ 0.87
TRIM39-209ENST00000428728 RAD21O60216 631 aa20.48■□□□□ 0.87
TRIM39-209ENST00000428728 DSG3P32926 999 aa20.48■□□□□ 0.87
TRIM39-209ENST00000428728 ZMYND8Q9ULU4 1186 aaPredicted RBP20.48■□□□□ 0.87
TRIM39-209ENST00000428728 PCDHB15Q9Y5E8 787 aa20.48■□□□□ 0.87
TRIM39-209ENST00000428728 GSG1L2A8MUP6 293 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
TRIM39-209ENST00000428728 GPAA1O43292 621 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 HOXC6P09630 235 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 ERCC3P19447 782 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 ADORA2AP29274 412 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 CNGA1P29973 690 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 CYP2C19P33261 490 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 LHX8Q68G74 356 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 DPP9Q86TI2 863 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 MB21D1Q8N884 522 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 PRO3102Q9H379 93 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 KANSL2Q9H9L4 492 aa20.47■□□□□ 0.87
TRIM39-209ENST00000428728 ROBO3Q96MS0 1386 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 MINDY4BA8MYZ0 360 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 M0R2C6 588 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 NCAPG2Q86XI2 1143 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 SHCBP1Q8NEM2 672 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
TRIM39-209ENST00000428728 GOPCQ9HD26 462 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 FBXO28Q9NVF7 368 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 STAP2Q9UGK3 403 aa20.46■□□□□ 0.87
TRIM39-209ENST00000428728 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-209ENST00000428728 SYN1P17600 705 aa20.45■□□□□ 0.86
TRIM39-209ENST00000428728 TDO2P48775 406 aa20.45■□□□□ 0.86
TRIM39-209ENST00000428728 RRP1P56182 461 aaKnown RBP20.45■□□□□ 0.86
TRIM39-209ENST00000428728 SBK1Q52WX2 424 aa20.45■□□□□ 0.86
TRIM39-209ENST00000428728 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-209ENST00000428728 RASA1P20936 1047 aa20.44■□□□□ 0.86
TRIM39-209ENST00000428728 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
TRIM39-209ENST00000428728 GIMAP6Q6P9H5 292 aa20.44■□□□□ 0.86
TRIM39-209ENST00000428728 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRIM39-209ENST00000428728 MKNK2Q9HBH9 465 aa20.44■□□□□ 0.86
TRIM39-209ENST00000428728 DDX20Q9UHI6 824 aaKnown RBP20.44■□□□□ 0.86
TRIM39-209ENST00000428728 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms