RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 A0A0G2JMZ2 1700 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 LAMA3Q16787 3333 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 PTPREP23469 700 aa18.72■□□□□ 0.59
SEC13-210ENST00000428626 CDK8P49336 464 aa18.72■□□□□ 0.59
SEC13-210ENST00000428626 LHX8Q68G74 356 aa18.72■□□□□ 0.59
SEC13-210ENST00000428626 TMEM179Q6ZVK1 233 aa18.72■□□□□ 0.59
SEC13-210ENST00000428626 CCAR1Q8IX12 1150 aaKnown RBP18.72■□□□□ 0.59
SEC13-210ENST00000428626 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEC13-210ENST00000428626 SWAP70Q9UH65 585 aa18.72■□□□□ 0.59
SEC13-210ENST00000428626 PFASO15067 1338 aa18.72■□□□□ 0.59
SEC13-210ENST00000428626 WDR78Q5VTH9 848 aa18.71■□□□□ 0.59
SEC13-210ENST00000428626 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
SEC13-210ENST00000428626 NPLOC4Q8TAT6 608 aa18.71■□□□□ 0.59
SEC13-210ENST00000428626 DCTPP1Q9H773 170 aa18.71■□□□□ 0.59
SEC13-210ENST00000428626 SLC4A4Q9Y6R1 1079 aa18.71■□□□□ 0.59
SEC13-210ENST00000428626 PARP14Q460N5 1801 aa18.71■□□□□ 0.59
SEC13-210ENST00000428626 FRMPD3Q5JV73 1810 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 SLC15A5A6NIM6 579 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 IGHA2P01877 340 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 CCNA1P78396 465 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 GRB14Q14449 540 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 COG2Q14746 738 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 C16orf86Q6ZW13 317 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 TRMT44Q8IYL2 757 aaKnown RBP18.7■□□□□ 0.58
SEC13-210ENST00000428626 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 MOV10L1Q9BXT6 1211 aaKnown RBP18.7■□□□□ 0.58
SEC13-210ENST00000428626 NBPF3Q9H094 633 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 ECHDC1Q9NTX5 307 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 TMX2Q9Y320 296 aa18.7■□□□□ 0.58
SEC13-210ENST00000428626 HOXC6P09630 235 aa18.69■□□□□ 0.58
SEC13-210ENST00000428626 ICA1Q05084 483 aa18.69■□□□□ 0.58
SEC13-210ENST00000428626 C7orf61Q8IZ16 206 aa18.69■□□□□ 0.58
SEC13-210ENST00000428626 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.69■□□□□ 0.58
SEC13-210ENST00000428626 TANGO6Q9C0B7 1094 aa18.69■□□□□ 0.58
SEC13-210ENST00000428626 C11orf49Q9H6J7 331 aa18.69■□□□□ 0.58
SEC13-210ENST00000428626 STAP2Q9UGK3 403 aa18.69■□□□□ 0.58
SEC13-210ENST00000428626 COL6A1P12109 1028 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 DSG3P32926 999 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 TRPV1Q8NER1 839 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 OSBP2Q969R2 916 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 ATG4CQ96DT6 458 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 STRBPQ96SI9 672 aaKnown RBP18.68■□□□□ 0.58
SEC13-210ENST00000428626 VCPKMTQ9H867 229 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
SEC13-210ENST00000428626 ZMYND8Q9ULU4 1186 aaPredicted RBP18.68■□□□□ 0.58
SEC13-210ENST00000428626 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
SEC13-210ENST00000428626 GREB1LQ9C091 1923 aaPredicted RBP18.68■□□□□ 0.58
SEC13-210ENST00000428626 GSG1L2A8MUP6 293 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
SEC13-210ENST00000428626 CYP2C19P33261 490 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 KBTBD3Q8NAB2 608 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 CCDC17Q96LX7 622 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 SPATC1LQ9H0A9 340 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 HOXC10Q9NYD6 342 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 ZNF236Q9UL36 1845 aa18.67■□□□□ 0.58
SEC13-210ENST00000428626 COL11A1P12107 1806 aaPredicted RBP18.66■□□□□ 0.58
SEC13-210ENST00000428626 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
SEC13-210ENST00000428626 ERCC3P19447 782 aa18.66■□□□□ 0.58
SEC13-210ENST00000428626 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
SEC13-210ENST00000428626 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
SEC13-210ENST00000428626 LPAR1Q92633 364 aa18.66■□□□□ 0.58
SEC13-210ENST00000428626 ARHGEF10LQ9HCE6 1279 aa18.66■□□□□ 0.58
SEC13-210ENST00000428626 EPB41L4AQ9HCS5 686 aaPredicted RBP18.66■□□□□ 0.58
SEC13-210ENST00000428626 FBXO28Q9NVF7 368 aa18.66■□□□□ 0.58
SEC13-210ENST00000428626 SOX1O00570 391 aaPredicted RBP18.65■□□□□ 0.58
SEC13-210ENST00000428626 COBLO75128 1261 aa18.65■□□□□ 0.58
SEC13-210ENST00000428626 FLOT1O75955 427 aa18.65■□□□□ 0.58
SEC13-210ENST00000428626 SYN1P17600 705 aa18.65■□□□□ 0.58
SEC13-210ENST00000428626 ADORA2AP29274 412 aa18.65■□□□□ 0.58
SEC13-210ENST00000428626 GDF15Q99988 308 aa18.65■□□□□ 0.58
SEC13-210ENST00000428626 IVNS1ABPQ9Y6Y0 642 aa18.65■□□□□ 0.58
SEC13-210ENST00000428626 DNAH12Q6ZR08 3092 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 M0R2C6 588 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 RASA1P20936 1047 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 MFSD14CQ5VZR4 134 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 SAMD1Q6SPF0 538 aaPredicted RBP18.64■□□□□ 0.57
SEC13-210ENST00000428626 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 SHCBP1Q8NEM2 672 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 APPBP2Q92624 585 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 ADAMTS5Q9UNA0 930 aa18.64■□□□□ 0.57
SEC13-210ENST00000428626 ZNFX1Q9P2E3 1918 aaKnown RBP18.63■□□□□ 0.57
SEC13-210ENST00000428626 WDR46O15213 610 aaKnown RBP18.63■□□□□ 0.57
SEC13-210ENST00000428626 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
SEC13-210ENST00000428626 CYBAP13498 195 aa18.63■□□□□ 0.57
SEC13-210ENST00000428626 TMEM132BQ14DG7 1078 aa18.63■□□□□ 0.57
SEC13-210ENST00000428626 LRRC26Q2I0M4 334 aa18.63■□□□□ 0.57
SEC13-210ENST00000428626 SBK1Q52WX2 424 aa18.63■□□□□ 0.57
SEC13-210ENST00000428626 KANSL2Q9H9L4 492 aa18.63■□□□□ 0.57
SEC13-210ENST00000428626 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
SEC13-210ENST00000428626 DDX20Q9UHI6 824 aaKnown RBP18.63■□□□□ 0.57
SEC13-210ENST00000428626 GPAA1O43292 621 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 PLS1Q14651 629 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 DPP9Q86TI2 863 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 MB21D1Q8N884 522 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 PI4K2BQ8TCG2 481 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
SEC13-210ENST00000428626 SH2D4AQ9H788 454 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms