RNA–Protein interactions for RNA: ENST00000428376.6

SFTPA1-203, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-203ENST00000428376 MKL1Q969V6 931 aa15.47■□□□□ 0.07
SFTPA1-203ENST00000428376 TMEM39BQ9GZU3 492 aa15.47■□□□□ 0.07
SFTPA1-203ENST00000428376 GJB4Q9NTQ9 266 aa15.47■□□□□ 0.07
SFTPA1-203ENST00000428376 NYAP2Q9P242 653 aa15.47■□□□□ 0.07
SFTPA1-203ENST00000428376 CNTNAP5Q8WYK1 1306 aa15.47■□□□□ 0.07
SFTPA1-203ENST00000428376 UBE2Q2LH0YL09 131 aa15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 NCLP19338 710 aaKnown RBP15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 SMARCA1P28370 1054 aa15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 FAM173BQ6P4H8 233 aa15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 STAG2Q8N3U4 1231 aa15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 SCAND2PQ9GZW5 306 aaPredicted RBP15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 GPRC5DQ9NZD1 345 aa15.46■□□□□ 0.07
SFTPA1-203ENST00000428376 PARP1P09874 1014 aaKnown RBP15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 XBP1P17861 261 aa15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 KIF4BQ2VIQ3 1234 aa15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 TBC1D10BQ4KMP7 808 aaPredicted RBP15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 CFAP45Q9UL16 551 aa15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 DICER1Q9UPY3 1922 aaKnown RBP15.46■□□□□ 0.06
SFTPA1-203ENST00000428376 GREB1LQ9C091 1923 aaPredicted RBP15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 SNHG28P0DPA3 235 aa15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 RASA3Q14644 834 aa15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 KLHL40Q2TBA0 621 aa15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 ZNF396Q96N95 335 aaPredicted RBP15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 GDPD2Q9HCC8 539 aa15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 CABP5Q9NP86 173 aa15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 MYH8P13535 1937 aa15.45■□□□□ 0.06
SFTPA1-203ENST00000428376 U2AF2P26368 475 aaKnown RBP eCLIP15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 RNF181Q9P0P0 153 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 DDX49Q9Y6V7 483 aaKnown RBP15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 SBF1O95248 1867 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 ELP1O95163 1332 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 USP17L5A8MUK1 530 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 KLRF2D3W0D1 207 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 FIBPO43427 364 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 MMP1P03956 469 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 PDHBP11177 359 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 SEPT2Q15019 361 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 SAFBQ15424 915 aaKnown RBP eCLIP15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 PFKFB3Q16875 520 aaPredicted RBP15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 ASPRV1Q53RT3 343 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 TFIP11Q9UBB9 837 aaKnown RBP15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 HACL1Q9UJ83 578 aa15.44■□□□□ 0.06
SFTPA1-203ENST00000428376 SCG2P13521 617 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 EEF2P13639 858 aaKnown RBP15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 RRP1BQ14684 758 aaKnown RBP15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 CLEC10AQ8IUN9 316 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 SIAH1Q8IUQ4 282 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 TEPSINQ96N21 525 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 SYNPO2Q9UMS6 1093 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 KIF28PB7ZC32 967 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 GDF11O95390 407 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 MBD3O95983 291 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 GH2P01242 217 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 FOXP1Q9H334 677 aaPredicted RBP15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
SFTPA1-203ENST00000428376 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 CYTH3O43739 400 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 JAG1P78504 1218 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 ATP2B2Q01814 1243 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 ICA1Q05084 483 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 SHROOM1Q2M3G4 852 aaPredicted RBP15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 SLC35G1Q2M3R5 365 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 C9orf131Q5VYM1 1079 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 CDAN1Q8IWY9 1227 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 LEO1Q8WVC0 666 aaPredicted RBP15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 PHF20Q9BVI0 1012 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 SH3GLB2Q9NR46 395 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 RCOR1Q9UKL0 485 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 KCNJ14Q9UNX9 436 aa15.42■□□□□ 0.06
SFTPA1-203ENST00000428376 GOLGA8HP0CJ92 632 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 UBE2HP62256 183 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 GNL2Q13823 731 aaKnown RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 GPATCH4Q5T3I0 446 aaKnown RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 MYSM1Q5VVJ2 828 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 APOBEC3FQ8IUX4 373 aaKnown RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 FAM177A1Q8N128 213 aaPredicted RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 GPT2Q8TD30 523 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 SPATA32Q96LK8 384 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 DEFB129Q9H1M3 183 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 TCHHQ07283 1943 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 ASTN2O75129 1339 aaPredicted RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 EPS15P42566 896 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 DIS3L2Q8IYB7 885 aaKnown RBP15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 RIOX1Q9H6W3 641 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 VPS54Q9P1Q0 977 aa15.41■□□□□ 0.06
SFTPA1-203ENST00000428376 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
SFTPA1-203ENST00000428376 NOSTRINQ8IVI9 506 aa15.4■□□□□ 0.06
SFTPA1-203ENST00000428376 GMCL1P1Q8NEA9 526 aa15.4■□□□□ 0.06
SFTPA1-203ENST00000428376 TRPM4Q8TD43 1214 aa15.4■□□□□ 0.06
SFTPA1-203ENST00000428376 DCAF4Q8WV16 495 aa15.4■□□□□ 0.06
SFTPA1-203ENST00000428376 SHISA4Q96DD7 197 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms