RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 CCDC196A0A1B0GTZ2 297 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 GRM4Q14833 912 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 CPLX2Q6PUV4 134 aaKnown RBP18.38■□□□□ 0.53
SCRN1-205ENST00000425819 SMARCC2Q8TAQ2 1214 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 ZKSCAN4Q969J2 545 aaPredicted RBP18.38■□□□□ 0.53
SCRN1-205ENST00000425819 KLRG1Q96E93 195 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
SCRN1-205ENST00000425819 RAD21O60216 631 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 USP2O75604 605 aaPredicted RBP18.38■□□□□ 0.53
SCRN1-205ENST00000425819 PLEKHA8P1O95397 391 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 KIF5BP33176 963 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 NF2P35240 595 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 NTRK3Q16288 839 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 PHKBQ93100 1093 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 MKL1Q969V6 931 aa18.38■□□□□ 0.53
SCRN1-205ENST00000425819 A0A1W2PRG0 241 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 USP17L5A8MUK1 530 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 CDKL5O76039 1030 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 GOLGA8HP0CJ92 632 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 ECE1P42892 770 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 LDHDQ86WU2 507 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 SCYL3Q8IZE3 742 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 STAG2Q8N3U4 1231 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
SCRN1-205ENST00000425819 TRAF5O00463 557 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 PPP1R12BO60237 982 aaPredicted RBP18.36■□□□□ 0.53
SCRN1-205ENST00000425819 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
SCRN1-205ENST00000425819 PDHBP11177 359 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 IFNAR1P17181 557 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
SCRN1-205ENST00000425819 TMTC3Q6ZXV5 915 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCRN1-205ENST00000425819 SLC26A6Q9BXS9 759 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 GINM1Q9NU53 330 aa18.36■□□□□ 0.53
SCRN1-205ENST00000425819 FRMPD2Q68DX3 1309 aaPredicted RBP18.35■□□□□ 0.53
SCRN1-205ENST00000425819 FDPSP14324 419 aaKnown RBP18.35■□□□□ 0.53
SCRN1-205ENST00000425819 CHMP5Q9NZZ3 219 aa18.35■□□□□ 0.53
SCRN1-205ENST00000425819 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
SCRN1-205ENST00000425819 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
SCRN1-205ENST00000425819 PALM3A6NDB9 673 aaPredicted RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 FOSBP53539 338 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 SSRP1Q08945 709 aaKnown RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 TTLL12Q14166 644 aaPredicted RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 PICK1Q9NRD5 415 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 CIZ1Q9ULV3 898 aaPredicted RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 F5H6K3 240 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 FMNL1O95466 1100 aaPredicted RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 IREB2P48200 963 aaKnown RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 GNAQP50148 359 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 MAP3K9P80192 1104 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 KLRC3Q07444 240 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 PKP1Q13835 747 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 ZYXQ15942 572 aaKnown RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 CCDC96Q2M329 555 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 LARP1BQ659C4 914 aaKnown RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 MOB2Q70IA6 237 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 ZNF408Q9H9D4 720 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 GPCPD1Q9NPB8 672 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 ISY1Q9ULR0 285 aaKnown RBP18.34■□□□□ 0.53
SCRN1-205ENST00000425819 TMX2Q9Y320 296 aa18.34■□□□□ 0.53
SCRN1-205ENST00000425819 KLRF2D3W0D1 207 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 UBE2Q2LH0YL09 131 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 NDUFB10O96000 172 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 PTPRAP18433 802 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 SYT1P21579 422 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 FUT2Q10981 343 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 NOL9Q5SY16 702 aaKnown RBP18.33■□□□□ 0.52
SCRN1-205ENST00000425819 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.33■□□□□ 0.52
SCRN1-205ENST00000425819 TRIM22Q8IYM9 498 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 GMCL1P1Q8NEA9 526 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 FEZ1Q99689 392 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 CPVLQ9H3G5 476 aa18.33■□□□□ 0.52
SCRN1-205ENST00000425819 MYH4Q9Y623 1939 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 SLC1A4P43007 532 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 ZNF543Q08ER8 600 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 VGLL4Q14135 290 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 ASPRV1Q53RT3 343 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 KCTD1Q719H9 257 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 SPICE1Q8N0Z3 855 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 DCAF4Q8WV16 495 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 PIBF1Q8WXW3 757 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 SYNPO2Q9UMS6 1093 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 KIF3AQ9Y496 699 aa18.32■□□□□ 0.52
SCRN1-205ENST00000425819 CNTNAP5Q8WYK1 1306 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms