RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ST5P78524 1137 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 MFSD14BQ5SR56 506 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 BPIFA3Q9BQP9 254 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 SCN7AQ01118 1682 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
UBR4-207ENST00000425413 CDK11BP21127 795 aaKnown RBP13.21□□□□□ -0.29
UBR4-207ENST00000425413 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 TEX11Q8IYF3 940 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 QTRT2Q9H974 415 aaKnown RBP13.21□□□□□ -0.29
UBR4-207ENST00000425413 VAT1LQ9HCJ6 419 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 POLLQ9UGP5 575 aa13.21□□□□□ -0.29
UBR4-207ENST00000425413 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.29
UBR4-207ENST00000425413 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
UBR4-207ENST00000425413 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBR4-207ENST00000425413 DDR1Q08345 913 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 PICALMQ13492 652 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 SBK1Q52WX2 424 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 PCP11498 1178 aaKnown RBP13.2□□□□□ -0.3
UBR4-207ENST00000425413 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 BLZF1Q9H2G9 400 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
UBR4-207ENST00000425413 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 IKBKBO14920 756 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 GTF2IP78347 998 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
UBR4-207ENST00000425413 PDS5AQ29RF7 1337 aaKnown RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 KIF5BP33176 963 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 PLIN2Q99541 437 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 RGL2O15211 777 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 GSTO1P78417 241 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 SLC35G1Q2M3R5 365 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 TNFRSF25Q93038 417 aa13.19□□□□□ -0.3
UBR4-207ENST00000425413 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 RTFDC1Q9BY42 306 aaPredicted RBP13.19□□□□□ -0.3
UBR4-207ENST00000425413 GSDMDP57764 484 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
UBR4-207ENST00000425413 A0A1B0GUL6 1792 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 LDHCP07864 332 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 SLURP2P0DP57 97 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 RASA1P20936 1047 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 CEP135Q66GS9 1140 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
UBR4-207ENST00000425413 NEMFO60524 1076 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
UBR4-207ENST00000425413 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 MED15Q96RN5 788 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 EYA3Q99504 573 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
UBR4-207ENST00000425413 PP2D1A8MPX8 630 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 CYTH3O43739 400 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 CDK8P49336 464 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 IL17AQ16552 155 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
UBR4-207ENST00000425413 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
UBR4-207ENST00000425413 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■■■□□ 18.4
UBR4-207ENST00000425413 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
UBR4-207ENST00000425413 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
UBR4-207ENST00000425413 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 SCNN1DP51172 638 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 MORC3Q14149 939 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 INF2Q27J81 1249 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 BLIDQ8IZY5 108 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
UBR4-207ENST00000425413 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
UBR4-207ENST00000425413 E4F1Q66K89 784 aaPredicted RBP13.16□□□□□ -0.3
UBR4-207ENST00000425413 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 ZMYND15Q9H091 742 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 MYH6P13533 1939 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 SLFN14P0C7P3 912 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 CRY2Q49AN0 593 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 IMPACTQ9P2X3 320 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 FLT1P17948 1338 aa13.16□□□□□ -0.3
UBR4-207ENST00000425413 SARSP49591 514 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms