RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 DDX56Q9NY93 547 aaKnown RBP4.85□□□□□ -1.63
SF3B1-205ENST00000424674 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-205ENST00000424674 SORBS3O60504 671 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 MCCP23508 829 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 ZEB1P37275 1124 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-205ENST00000424674 CAP2P40123 477 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 RHBDL3P58872 404 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 ETF1P62495 437 aaKnown RBP4.84□□□□□ -1.63
SF3B1-205ENST00000424674 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
SF3B1-205ENST00000424674 PSMD2Q13200 908 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 IKZF1Q13422 519 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 NKPD1Q17RQ9 610 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 MEI1Q5TIA1 1274 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 SLC23A3Q6PIS1 610 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 VPS37DQ86XT2 251 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 PRPF38AQ8NAV1 312 aaKnown RBP4.84□□□□□ -1.63
SF3B1-205ENST00000424674 MIPEPQ99797 713 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 FBRSQ9HAH7 460 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 INPP5FQ9Y2H2 1132 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 MRPL42Q9Y6G3 142 aaKnown RBP4.84□□□□□ -1.63
SF3B1-205ENST00000424674 SNCAIPQ9Y6H5 919 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 AK5Q9Y6K8 562 aa4.84□□□□□ -1.63
SF3B1-205ENST00000424674 PITPNM2Q9BZ72 1349 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 SLITRK5O94991 958 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 PAX3P23760 479 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 SEPT6Q14141 434 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 SLBPQ14493 270 aaKnown RBP eCLIP4.83□□□□□ -1.64
SF3B1-205ENST00000424674 CCSAPQ6IQ19 270 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-205ENST00000424674 TMC4Q7Z404 712 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 MFSD2AQ8NA29 543 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 FAM168AQ92567 244 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 RELTQ969Z4 430 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 RPS6KC1Q96S38 1066 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 SLKQ9H2G2 1235 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-205ENST00000424674 VTI1BQ9UEU0 232 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
SF3B1-205ENST00000424674 G3BP2Q9UN86 482 aaKnown RBP4.83□□□□□ -1.64
SF3B1-205ENST00000424674 COMMD10Q9Y6G5 202 aa4.83□□□□□ -1.64
SF3B1-205ENST00000424674 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-205ENST00000424674 CARMIL2Q6F5E8 1435 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 RBAK-RBAKDNI3L0D1 243 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 ZNF865P0CJ78 1059 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-205ENST00000424674 TNNI2P48788 182 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 CDK8P49336 464 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 LIG3P49916 1009 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 ZP2Q05996 745 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 NKG7Q16617 165 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 WDR78Q5VTH9 848 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 NBPF6Q5VWK0 638 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 CLEC4GQ6UXB4 293 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 AGMOQ6ZNB7 445 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 KRBA2Q6ZNG9 492 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 C22orf34Q6ZV56 151 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 HID1Q8IV36 788 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 FMNL3Q8IVF7 1028 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 RPUSD2Q8IZ73 545 aaKnown RBP4.82□□□□□ -1.64
SF3B1-205ENST00000424674 MFSD4AQ8N468 514 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 FLAD1Q8NFF5 587 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 JDP2Q8WYK2 163 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 EVI5LQ96CN4 794 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 SCYL1Q96KG9 808 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 NBPF4Q96M43 638 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 SENP7Q9BQF6 1050 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 JADE2Q9NQC1 790 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 PRDM7Q9NQW5 492 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 PCDHB5Q9Y5E4 795 aa4.82□□□□□ -1.64
SF3B1-205ENST00000424674 PRR33A8MZF0 331 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 FAM155AB1AL88 458 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-205ENST00000424674 C8AP07357 584 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 HSP90AA1P07900 732 aaKnown RBP4.81□□□□□ -1.64
SF3B1-205ENST00000424674 PDGFRBP09619 1106 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 CTSHP09668 335 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 GRK4P32298 578 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 DAB2P98082 770 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 OS9Q13438 667 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-205ENST00000424674 PRAMEF13Q5VWM6 474 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 LETMD1Q6P1Q0 360 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 CKAP2LQ8IYA6 745 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 MKL1Q969V6 931 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 C8orf48Q96LL4 319 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 MIR1-1HGQ9H1L0 117 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 GNL3LQ9NVN8 582 aaKnown RBP4.81□□□□□ -1.64
SF3B1-205ENST00000424674 PNMA2Q9UL42 364 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 TACC3Q9Y6A5 838 aa4.81□□□□□ -1.64
SF3B1-205ENST00000424674 PLIN1O60240 522 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 WDHD1O75717 1129 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-205ENST00000424674 CST3P01034 146 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-205ENST00000424674 FOXD4Q12950 439 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-205ENST00000424674 PLEKHG4Q58EX7 1191 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 MCF2L2Q86YR7 1114 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 XAGE3Q8WTP9 111 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 CEP89Q96ST8 783 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 MTA3Q9BTC8 594 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 CAPN6Q9Y6Q1 641 aa4.8□□□□□ -1.64
SF3B1-205ENST00000424674 H3BS24 57 aa4.79□□□□□ -1.64
SF3B1-205ENST00000424674 GFRA2O00451 464 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms