RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TMED8Q6PL24 325 aaPredicted RBP20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 ZNF236Q9UL36 1845 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 TRIM27P14373 513 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 ADCYAP1R1P41586 468 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 PLCD1P51178 756 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 LRRC41Q15345 812 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 ANO1Q5XXA6 986 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 MIGA1Q8NAN2 632 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 SSH3Q8TE77 659 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 SPATC1LQ9H0A9 340 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 SLC5A4Q9NY91 659 aa20.41■□□□□ 0.86
CHCHD3-202ENST00000423635 FOSL2P15408 326 aa20.4■□□□□ 0.86
CHCHD3-202ENST00000423635 ERCC3P19447 782 aa20.4■□□□□ 0.86
CHCHD3-202ENST00000423635 DBNLQ9UJU6 430 aaKnown RBP20.4■□□□□ 0.86
CHCHD3-202ENST00000423635 TACC3Q9Y6A5 838 aa20.4■□□□□ 0.86
CHCHD3-202ENST00000423635 A0A1W2PRG0 241 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 IDH1O75874 414 aaKnown RBP20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 ATP8B2P98198 1209 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 GABPAQ06546 454 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 SEPT2Q15019 361 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 PRAMEF19Q5SWL8 479 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 MB21D1Q8N884 522 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 MROH8Q9H579 483 aa20.39■□□□□ 0.85
CHCHD3-202ENST00000423635 ITGB8P26012 769 aa20.38■□□□□ 0.85
CHCHD3-202ENST00000423635 TLE2Q04725 743 aa20.38■□□□□ 0.85
CHCHD3-202ENST00000423635 FERMT2Q96AC1 680 aa20.38■□□□□ 0.85
CHCHD3-202ENST00000423635 PHF24Q9UPV7 400 aa20.38■□□□□ 0.85
CHCHD3-202ENST00000423635 NOP58Q9Y2X3 529 aaKnown RBP20.38■□□□□ 0.85
CHCHD3-202ENST00000423635 MUC3AQ02505 3323 aa20.38■□□□□ 0.85
CHCHD3-202ENST00000423635 TTC28Q96AY4 2481 aa20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 SURF6O75683 361 aaKnown RBP20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 DSG3P32926 999 aa20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 FAM47AQ5JRC9 791 aa20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 MAML3Q96JK9 1138 aa20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 RIOK1Q9BRS2 568 aaKnown RBP20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 NRBP1Q9UHY1 535 aa20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
CHCHD3-202ENST00000423635 KIAA0355O15063 1070 aa20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 MYCNP04198 464 aaPredicted RBP20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 EPHB4P54760 987 aa20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 EAF2Q96CJ1 260 aaPredicted RBP20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 CCDC8Q9H0W5 538 aaPredicted RBP20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 TLR7Q9NYK1 1049 aaKnown RBP20.36■□□□□ 0.85
CHCHD3-202ENST00000423635 CLTBP09497 229 aa20.35■□□□□ 0.85
CHCHD3-202ENST00000423635 RNPC3Q96LT9 517 aaKnown RBP20.35■□□□□ 0.85
CHCHD3-202ENST00000423635 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
CHCHD3-202ENST00000423635 ANTXR1Q9H6X2 564 aa20.35■□□□□ 0.85
CHCHD3-202ENST00000423635 POLR3DP05423 398 aaPredicted RBP20.34■□□□□ 0.85
CHCHD3-202ENST00000423635 KIAA1755Q5JYT7 1200 aa20.34■□□□□ 0.85
CHCHD3-202ENST00000423635 NCAPG2Q86XI2 1143 aa20.34■□□□□ 0.85
CHCHD3-202ENST00000423635 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 BCAR3O75815 825 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 RARBP10826 455 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 FCER1AP12319 257 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 GRIN2CQ14957 1233 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 TJAP1Q5JTD0 557 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 RNF180Q86T96 592 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 CLUAP1Q96AJ1 413 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 XPNPEP3Q9NQH7 507 aa20.33■□□□□ 0.85
CHCHD3-202ENST00000423635 A0A0G2JMZ2 1700 aa20.33■□□□□ 0.84
CHCHD3-202ENST00000423635 SMCHD1A6NHR9 2005 aa20.33■□□□□ 0.84
CHCHD3-202ENST00000423635 SLC25A27O95847 323 aa20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 RAG1P15918 1043 aa20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 PLS1Q14651 629 aa20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 TMEM179Q6ZVK1 233 aa20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 SIAH1Q8IUQ4 282 aa20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 FRAT1Q92837 279 aaPredicted RBP20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 TOX2Q96NM4 488 aa20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 DIS3Q9Y2L1 958 aaKnown RBP20.32■□□□□ 0.84
CHCHD3-202ENST00000423635 MPHOSPH10O00566 681 aaKnown RBP20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 FPGSQ05932 587 aa20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 TMEM57Q8N5G2 664 aa20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 ATG4CQ96DT6 458 aa20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 MCM9Q9NXL9 1143 aa20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 ADAMTS5Q9UNA0 930 aa20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 TMX2Q9Y320 296 aa20.31■□□□□ 0.84
CHCHD3-202ENST00000423635 MAGEB6P1A0A0J9YX57 407 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 A0A1W2PQ45 241 aaPredicted RBP20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 A0A1W2PQY0 241 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 FLOT1O75955 427 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 DNAJB2P25686 324 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 EVX2Q03828 476 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 TMEM132BQ14DG7 1078 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 ANKRD33Q7Z3H0 272 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 USP38Q8NB14 1042 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 TINF2Q9BSI4 451 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 TSEN34Q9BSV6 310 aaKnown RBP20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 TMEM39AQ9NV64 488 aa20.3■□□□□ 0.84
CHCHD3-202ENST00000423635 TNFRSF10AO00220 468 aa20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 PGK1P00558 417 aa20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 FAAP100Q0VG06 881 aa20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 ZNF792Q3KQV3 632 aa20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms