RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 NR5A1Q13285 461 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 GRM4Q14833 912 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 STX1AQ16623 288 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 STRIP1Q5VSL9 837 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
SNX20-203ENST00000423026 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 LZTS2Q9BRK4 669 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 CABP5Q9NP86 173 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 ZNF219Q9P2Y4 722 aaPredicted RBP10.36□□□□□ -0.75
SNX20-203ENST00000423026 USP25Q9UHP3 1055 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 BAZ2BQ9UIF8 2168 aaKnown RBP10.36□□□□□ -0.75
SNX20-203ENST00000423026 KIF20AO95235 890 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 PFKFB1P16118 471 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 CALML3P27482 149 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 SYKP43405 635 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 SCNN1DP51172 638 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 NLRP5P59047 1200 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 PFKFB3Q16875 520 aaPredicted RBP10.36□□□□□ -0.75
SNX20-203ENST00000423026 TIGD1Q96MW7 591 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 TMEM47Q9BQJ4 181 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 MRIQ9BWK5 157 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 ANO10Q9NW15 660 aa10.36□□□□□ -0.75
SNX20-203ENST00000423026 DDX60LQ5H9U9 1706 aaKnown RBP10.36□□□□□ -0.75
SNX20-203ENST00000423026 ECE2O60344 883 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 ADCY5O95622 1261 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 HLA-DOAP06340 250 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 ZSCAN20P17040 1043 aaPredicted RBP10.35□□□□□ -0.75
SNX20-203ENST00000423026 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
SNX20-203ENST00000423026 ZNF165P49910 485 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 TOB1P50616 345 aaPredicted RBP10.35□□□□□ -0.75
SNX20-203ENST00000423026 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 MXD3Q9BW11 206 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 SWAP70Q9UH65 585 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 MYH8P13535 1937 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 TRIM75PA6NK02 468 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 BMP15O95972 392 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
SNX20-203ENST00000423026 ATP2B1P20020 1258 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 CRKP46108 304 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 HDLBPQ00341 1268 aaKnown RBP10.35□□□□□ -0.75
SNX20-203ENST00000423026 RESP18Q5W5W9 173 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 CDC42EP5Q6NZY7 148 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
SNX20-203ENST00000423026 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 CBX8Q9HC52 389 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
SNX20-203ENST00000423026 FAM237AA0A1B0GTK4 181 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 GOLGA6L19H0YKK7 550 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 RBM5P52756 815 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNX20-203ENST00000423026 SHC4Q6S5L8 630 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 ZDHHC15Q96MV8 337 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 SERPINB13Q9UIV8 391 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 MTMR7Q9Y216 660 aa10.34□□□□□ -0.75
SNX20-203ENST00000423026 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 PARP1P09874 1014 aaKnown RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 PTPREP23469 700 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 APOBEC3HQ6NTF7 200 aaKnown RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 LUZP1Q86V48 1076 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 KIAA0825Q8IV33 1275 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 CCDC148Q8NFR7 591 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 C7orf43Q8WVR3 580 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 OSBPL5Q9H0X9 879 aaPredicted RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 KIAA1468Q9P260 1216 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 HOOK1Q9UJC3 728 aaKnown RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 PCDHB6Q9Y5E3 794 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 BECN2A8MW95 431 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 KLRF2D3W0D1 207 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 GABPAQ06546 454 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 AOC3Q16853 763 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 PPP4R3BQ5MIZ7 849 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 DACT2Q5SW24 774 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 CEP57L1Q8IYX8 460 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 CEP95Q96GE4 821 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 DDX4Q9NQI0 724 aaKnown RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 KCNH3Q9ULD8 1083 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 SRPRBQ9Y5M8 271 aaKnown RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 MORC2Q9Y6X9 1032 aaPredicted RBP10.33□□□□□ -0.76
SNX20-203ENST00000423026 MYO3BQ8WXR4 1341 aa10.33□□□□□ -0.76
SNX20-203ENST00000423026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.32□□□□□ -0.76
SNX20-203ENST00000423026 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 TRAPPC10P48553 1259 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 GALNT17Q6IS24 598 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 SLC16A10Q8TF71 515 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 SHISA4Q96DD7 197 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 DHX36Q9H2U1 1008 aaKnown RBP10.32□□□□□ -0.76
SNX20-203ENST00000423026 KCNQ5Q9NR82 932 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 FBXO2Q9UK22 296 aaPredicted RBP10.32□□□□□ -0.76
SNX20-203ENST00000423026 PLIN4Q96Q06 1357 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms