RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 ERVK-24P63145 666 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 PPARAQ07869 468 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 RBPJLQ9UBG7 517 aa16.6■□□□□ 0.25
CNBP-201ENST00000422453 MGAMO43451 1857 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 ADCY3O60266 1144 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 MFAP1P55081 439 aaKnown RBP16.59■□□□□ 0.25
CNBP-201ENST00000422453 UBXN2AP68543 259 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 CCNA1P78396 465 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
CNBP-201ENST00000422453 COG2Q14746 738 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 HOXC10Q9NYD6 342 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 RABGAP1Q9Y3P9 1069 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 HIP1O00291 1037 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 SDSP20132 328 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 MAPK4P31152 587 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 SIAH1Q8IUQ4 282 aa16.59■□□□□ 0.25
CNBP-201ENST00000422453 PEX10O60683 326 aa16.58■□□□□ 0.24
CNBP-201ENST00000422453 TSPY3P0CV98 308 aa16.58■□□□□ 0.24
CNBP-201ENST00000422453 TSPY8P0CW00 308 aa16.58■□□□□ 0.24
CNBP-201ENST00000422453 IRF5Q13568 498 aa16.58■□□□□ 0.24
CNBP-201ENST00000422453 Q3C1V9 767 aa16.58■□□□□ 0.24
CNBP-201ENST00000422453 VPS53Q5VIR6 699 aa16.58■□□□□ 0.24
CNBP-201ENST00000422453 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
CNBP-201ENST00000422453 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
CNBP-201ENST00000422453 WDR46O15213 610 aaKnown RBP16.57■□□□□ 0.24
CNBP-201ENST00000422453 FLOT1O75955 427 aa16.57■□□□□ 0.24
CNBP-201ENST00000422453 WDR78Q5VTH9 848 aa16.57■□□□□ 0.24
CNBP-201ENST00000422453 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
CNBP-201ENST00000422453 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
CNBP-201ENST00000422453 CCDC171Q6TFL3 1326 aa16.57■□□□□ 0.24
CNBP-201ENST00000422453 SPDYE16A6NNV3 312 aaPredicted RBP16.56■□□□□ 0.24
CNBP-201ENST00000422453 ALX1Q15699 326 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 KIAA1755Q5JYT7 1200 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 PXYLP1Q8TE99 480 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 NUDT12Q9BQG2 462 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 NYAP2Q9P242 653 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 HSPD1P10809 573 aaKnown RBP16.56■□□□□ 0.24
CNBP-201ENST00000422453 ELNP15502 786 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 TFAP4Q01664 338 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
CNBP-201ENST00000422453 SOCS4Q8WXH5 440 aa16.56■□□□□ 0.24
CNBP-201ENST00000422453 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 FOXP2O15409 715 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 TTLL1O95922 423 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 FGAP02671 866 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 PDE4AP27815 886 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 PLEKHH3Q7Z736 793 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 ZNF589Q86UQ0 364 aaPredicted RBP16.55■□□□□ 0.24
CNBP-201ENST00000422453 MB21D1Q8N884 522 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 PORCNQ9H237 461 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
CNBP-201ENST00000422453 CNMDO75829 334 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 EN2P19622 333 aaPredicted RBP16.54■□□□□ 0.24
CNBP-201ENST00000422453 DSG3P32926 999 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 MTFR1Q15390 333 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 GPR142Q7Z601 462 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 BTBD7Q9P203 1132 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 GJD2Q9UKL4 321 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 IVNS1ABPQ9Y6Y0 642 aa16.54■□□□□ 0.24
CNBP-201ENST00000422453 KIAA0100Q14667 2235 aaKnown RBP16.54■□□□□ 0.24
CNBP-201ENST00000422453 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 F5H6K3 240 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 RANBP6O60518 1105 aaKnown RBP16.53■□□□□ 0.24
CNBP-201ENST00000422453 CCL5P13501 91 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 CYP2B6P20813 491 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 KLRC3Q07444 240 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 PLS1Q14651 629 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 INHAP05111 366 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
CNBP-201ENST00000422453 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
CNBP-201ENST00000422453 HMGCRP04035 888 aa16.52■□□□□ 0.23
CNBP-201ENST00000422453 RGS2P41220 211 aa16.52■□□□□ 0.23
CNBP-201ENST00000422453 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.23
CNBP-201ENST00000422453 MKL1Q969V6 931 aa16.52■□□□□ 0.23
CNBP-201ENST00000422453 SPATC1LQ9H0A9 340 aa16.52■□□□□ 0.23
CNBP-201ENST00000422453 INCENPQ9NQS7 918 aa16.52■□□□□ 0.23
CNBP-201ENST00000422453 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.23
CNBP-201ENST00000422453 STX8Q9UNK0 236 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms