RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 WNT10BO00744 389 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 PRPF3O43395 683 aaKnown RBP8.5□□□□□ -1.05
BDNF-209ENST00000420794 DTNBO60941 627 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 KCNA3P22001 575 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 UBE2HP62256 183 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 SEPT2Q15019 361 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 OTUD7BQ6GQQ9 843 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 SASS6Q6UVJ0 657 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 CDC37L1Q7L3B6 337 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 TANGO6Q9C0B7 1094 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 DEFB129Q9H1M3 183 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 ADARB2Q9NS39 739 aaKnown RBP8.5□□□□□ -1.05
BDNF-209ENST00000420794 MTMR4Q9NYA4 1195 aa8.5□□□□□ -1.05
BDNF-209ENST00000420794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
BDNF-209ENST00000420794 FRMPD2Q68DX3 1309 aaPredicted RBP8.5□□□□□ -1.05
BDNF-209ENST00000420794 TPM4P67936 248 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 NBPF9Q3BBW0 867 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 SMARCC2Q8TAQ2 1214 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 CDK5RAP3Q96JB5 506 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 RAB34Q9BZG1 259 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 GGA3Q9NZ52 723 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 CNPY2Q9Y2B0 182 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 hCG_1642624A0A1W2PR95 340 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 BMP3P12645 472 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 GALNT17Q6IS24 598 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 ARMC9Q7Z3E5 817 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 KRT26Q7Z3Y9 468 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 AGXT2Q9BYV1 514 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 TMEM39BQ9GZU3 492 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 VPS54Q9P1Q0 977 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 PNMA2Q9UL42 364 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 TMEM232C9JQI7 657 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 UBA5Q9GZZ9 404 aa8.49□□□□□ -1.05
BDNF-209ENST00000420794 DDX4Q9NQI0 724 aaKnown RBP8.49□□□□□ -1.05
BDNF-209ENST00000420794 STK36Q9NRP7 1315 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 DDNO94850 711 aaPredicted RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 EEF2P13639 858 aaKnown RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 PTGER2P43116 358 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 PNMA8AQ86V59 439 aaPredicted RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 DCAF4Q8WV16 495 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 WRNIP1Q96S55 665 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 NYAP2Q9P242 653 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 KCNJ14Q9UNX9 436 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 COL1A1P02452 1464 aaPredicted RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 DDTLA6NHG4 134 aaPredicted RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 hCG_1984214I3L0E3 225 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 ZBED4O75132 1171 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 GRM4Q14833 912 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 TMEM266Q2M3C6 531 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 ZNF713Q8N859 430 aaPredicted RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 DDX60Q8IY21 1712 aaKnown RBP8.48□□□□□ -1.05
BDNF-209ENST00000420794 USP17L5A8MUK1 530 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 SPTLC2O15270 562 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 GSE1Q14687 1217 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 MAP3K14Q99558 947 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 TNMDQ9H2S6 317 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 GINM1Q9NU53 330 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 PPP2R3BQ9Y5P8 575 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 LRP5O75197 1615 aa8.48□□□□□ -1.05
BDNF-209ENST00000420794 CDC27P30260 824 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 ADCY7P51828 1080 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 EVCP57679 992 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 PKP1Q13835 747 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 KRT25Q7Z3Z0 450 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 SPICE1Q8N0Z3 855 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 KIFC2Q96AC6 838 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 NAP1L4Q99733 375 aaKnown RBP8.47□□□□□ -1.05
BDNF-209ENST00000420794 GPRC5DQ9NZD1 345 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 DUOX1Q9NRD9 1551 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 SMCO2A6NFE2 343 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 MCTP2Q6DN12 878 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 KCTD1Q719H9 257 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 NUP62CLQ9H1M0 184 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.47□□□□□ -1.05
BDNF-209ENST00000420794 F5H6K3 240 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 PLEKHA8P1O95397 391 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 STAT2P52630 851 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 KLRC3Q07444 240 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 KLHL40Q2TBA0 621 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 FAM160B2Q86V87 743 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 FBXO11Q86XK2 927 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 NOSTRINQ8IVI9 506 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 CCDC43Q96MW1 224 aaKnown RBP8.47□□□□□ -1.05
BDNF-209ENST00000420794 FAM198AQ9UFP1 575 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 COL24A1Q17RW2 1714 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 IRS2Q9Y4H2 1338 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 BECN2A8MW95 431 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 FOXP2O15409 715 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 SEC23AQ15436 765 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 BLIDQ8IZY5 108 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 REXO1Q8N1G1 1221 aaKnown RBP8.47□□□□□ -1.05
BDNF-209ENST00000420794 FSIP1Q8NA03 581 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 MTMR14Q8NCE2 650 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 TRIM44Q96DX7 344 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms