RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 RLFQ13129 1914 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 MYO5AQ9Y4I1 1855 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 CYP7A1P22680 504 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 CNGA1P29973 690 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 CERS3Q8IU89 383 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 CDX2Q99626 313 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 PRKAG2Q9UGJ0 569 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 TNNQ9UQP3 1299 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 MYH1P12882 1939 aa12.47□□□□□ -0.41
TNFAIP3-202ENST00000420009 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 SHMT1P34896 483 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 SHHQ15465 462 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 GJC2Q5T442 439 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 MIGA1Q8NAN2 632 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 SSH3Q8TE77 659 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 RPAP3Q9H6T3 665 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 ATP11BQ9Y2G3 1177 aa12.46□□□□□ -0.41
TNFAIP3-202ENST00000420009 SEPT4O43236 478 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 ADORA2AP29274 412 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 USP5P45974 858 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 TRIM60Q495X7 471 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 SLC39A5Q6ZMH5 540 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 SHCBP1Q8NEM2 672 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 MAFAQ8NHW3 353 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 MOV10L1Q9BXT6 1211 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 SEMA6BQ9H3T3 888 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 PDLIM7Q9NR12 457 aa12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 TLR7Q9NYK1 1049 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-202ENST00000420009 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 STRNO43815 780 aa12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 C7P10643 843 aa12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 PLCD1P51178 756 aa12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 SMAD3P84022 425 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 GABPAQ06546 454 aa12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 C1orf53Q5VUE5 145 aa12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-202ENST00000420009 A0A1W2PRG0 241 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 COBLO75128 1261 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 OS9Q13438 667 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 SEPT2Q15019 361 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 DPP9Q86TI2 863 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 BADQ92934 168 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 CABP5Q9NP86 173 aa12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 PRDM5Q9NQX1 630 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 NOP58Q9Y2X3 529 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-202ENST00000420009 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 TRIM43BA6NCK2 446 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 SURF6O75683 361 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 ERCC3P19447 782 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 COG2Q14746 738 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 LRRC41Q15345 812 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 FAM47AQ5JRC9 791 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 LCE2DQ5TA82 110 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 TMEM57Q8N5G2 664 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 MB21D1Q8N884 522 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 CLUAP1Q96AJ1 413 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 TRIM43Q96BQ3 446 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 ANTXR1Q9H6X2 564 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 ROBO3Q96MS0 1386 aa12.42□□□□□ -0.42
TNFAIP3-202ENST00000420009 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 BCAR3O75815 825 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 ADCYAP1R1P41586 468 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 MAP3K12Q12852 859 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 KIAA1755Q5JYT7 1200 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 FRAT1Q92837 279 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 MAML3Q96JK9 1138 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 CCDC8Q9H0W5 538 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 MROH8Q9H579 483 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 PHF24Q9UPV7 400 aa12.41□□□□□ -0.42
TNFAIP3-202ENST00000420009 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
TNFAIP3-202ENST00000420009 FOSL2P15408 326 aa12.4□□□□□ -0.42
TNFAIP3-202ENST00000420009 ITGB8P26012 769 aa12.4□□□□□ -0.42
TNFAIP3-202ENST00000420009 EPHB4P54760 987 aa12.4□□□□□ -0.42
TNFAIP3-202ENST00000420009 TLE2Q04725 743 aa12.4□□□□□ -0.42
TNFAIP3-202ENST00000420009 PRAMEF19Q5SWL8 479 aa12.4□□□□□ -0.42
TNFAIP3-202ENST00000420009 SLC5A4Q9NY91 659 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms