RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 GJD2Q9UKL4 321 aa24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 SPDYE16A6NNV3 312 aaPredicted RBP24.61■■□□□ 1.53
PKNOX1-202ENST00000418336 NACAP1Q9BZK3 213 aa24.61■■□□□ 1.53
PKNOX1-202ENST00000418336 NAPBQ9H115 298 aa24.61■■□□□ 1.53
PKNOX1-202ENST00000418336 VCPKMTQ9H867 229 aa24.61■■□□□ 1.53
PKNOX1-202ENST00000418336 ANAPC4Q9UJX5 808 aa24.61■■□□□ 1.53
PKNOX1-202ENST00000418336 FGRP09769 529 aa24.6■■□□□ 1.53
PKNOX1-202ENST00000418336 HSPD1P10809 573 aaKnown RBP24.6■■□□□ 1.53
PKNOX1-202ENST00000418336 IL25Q9H293 177 aa24.6■■□□□ 1.53
PKNOX1-202ENST00000418336 INCENPQ9NQS7 918 aa24.6■■□□□ 1.53
PKNOX1-202ENST00000418336 BTBD7Q9P203 1132 aa24.6■■□□□ 1.53
PKNOX1-202ENST00000418336 ZMYM6O95789 1325 aa24.6■■□□□ 1.53
PKNOX1-202ENST00000418336 POTEFA5A3E0 1075 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 HOXD10P28358 340 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 FLT3LGP49771 235 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 ERVK-9P63128 1117 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 ERVK-24P63145 666 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 IRF5Q13568 498 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 SLC9C1Q4G0N8 1177 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 TTC22Q5TAA0 569 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 GTF3C2Q8WUA4 911 aaPredicted RBP24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 NBPF3Q9H094 633 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 PORCNQ9H237 461 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 ARHGEF10LQ9HCE6 1279 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 CCDC171Q6TFL3 1326 aa24.59■■□□□ 1.53
PKNOX1-202ENST00000418336 KIAA0100Q14667 2235 aaKnown RBP24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 TNPO2O14787 897 aaKnown RBP24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 FGAP02671 866 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 CTDSPL2Q05D32 466 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 GPRC5AQ8NFJ5 357 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 LPAR1Q92633 364 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 MKNK2Q9HBH9 465 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 NYAP2Q9P242 653 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 RABGAP1Q9Y3P9 1069 aa24.58■■□□□ 1.53
PKNOX1-202ENST00000418336 SPICE1Q8N0Z3 855 aa24.57■■□□□ 1.52
PKNOX1-202ENST00000418336 NEDD1Q8NHV4 660 aa24.57■■□□□ 1.52
PKNOX1-202ENST00000418336 NKX2-3Q8TAU0 364 aa24.57■■□□□ 1.52
PKNOX1-202ENST00000418336 GRK4P32298 578 aa24.56■■□□□ 1.52
PKNOX1-202ENST00000418336 RAET1EQ8TD07 263 aa24.56■■□□□ 1.52
PKNOX1-202ENST00000418336 USP6NLQ92738 828 aa24.56■■□□□ 1.52
PKNOX1-202ENST00000418336 MKL1Q969V6 931 aa24.56■■□□□ 1.52
PKNOX1-202ENST00000418336 CEP95Q96GE4 821 aa24.56■■□□□ 1.52
PKNOX1-202ENST00000418336 MTMR4Q9NYA4 1195 aa24.56■■□□□ 1.52
PKNOX1-202ENST00000418336 MYH4Q9Y623 1939 aa24.55■■□□□ 1.52
PKNOX1-202ENST00000418336 NOVP48745 357 aa24.55■■□□□ 1.52
PKNOX1-202ENST00000418336 MTFR1Q15390 333 aa24.55■■□□□ 1.52
PKNOX1-202ENST00000418336 SH2D4AQ9H788 454 aa24.55■■□□□ 1.52
PKNOX1-202ENST00000418336 ADAMTS5Q9UNA0 930 aa24.55■■□□□ 1.52
PKNOX1-202ENST00000418336 WDR46O15213 610 aaKnown RBP24.54■■□□□ 1.52
PKNOX1-202ENST00000418336 DSG3P32926 999 aa24.54■■□□□ 1.52
PKNOX1-202ENST00000418336 COG2Q14746 738 aa24.54■■□□□ 1.52
PKNOX1-202ENST00000418336 FAM47AQ5JRC9 791 aa24.54■■□□□ 1.52
PKNOX1-202ENST00000418336 PXYLP1Q8TE99 480 aa24.54■■□□□ 1.52
PKNOX1-202ENST00000418336 PAGR1Q9BTK6 254 aa24.54■■□□□ 1.52
PKNOX1-202ENST00000418336 ELNP15502 786 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 PDE4BQ07343 736 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 NBPF11Q86T75 865 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 ZNF444Q8N0Y2 327 aaPredicted RBP24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 SLAIN1Q8ND83 568 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 COA7Q96BR5 231 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 ZNF287Q9HBT7 754 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 IL17RBQ9NRM6 502 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 LAMA4Q16363 1823 aa24.53■■□□□ 1.52
PKNOX1-202ENST00000418336 ORC4O43929 436 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 ADCY3O60266 1144 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 TFAP4Q01664 338 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 MORN1Q5T089 497 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 CWC27Q6UX04 472 aaKnown RBP24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 GPR142Q7Z601 462 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 TANGO6Q9C0B7 1094 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 FBXO28Q9NVF7 368 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 HOXC10Q9NYD6 342 aa24.52■■□□□ 1.52
PKNOX1-202ENST00000418336 NDUFB10O96000 172 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 MAPK4P31152 587 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 ATP2B2Q01814 1243 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 MLLT1Q03111 559 aaPredicted RBP24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 REPS2Q8NFH8 660 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 ATG4CQ96DT6 458 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 CLIP2Q9UDT6 1046 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 SYNPO2Q9UMS6 1093 aa24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 COL11A1P12107 1806 aaPredicted RBP24.51■■□□□ 1.51
PKNOX1-202ENST00000418336 F5H6K3 240 aa24.5■■□□□ 1.51
PKNOX1-202ENST00000418336 EN2P19622 333 aaPredicted RBP24.5■■□□□ 1.51
PKNOX1-202ENST00000418336 KLRC3Q07444 240 aa24.5■■□□□ 1.51
PKNOX1-202ENST00000418336 FAM83BQ5T0W9 1011 aa24.5■■□□□ 1.51
PKNOX1-202ENST00000418336 TBC1D10CQ8IV04 446 aa24.5■■□□□ 1.51
PKNOX1-202ENST00000418336 NUP88Q99567 741 aaPredicted RBP24.5■■□□□ 1.51
PKNOX1-202ENST00000418336 HIP1O00291 1037 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 NMT2O60551 498 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 TTLL1O95922 423 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 SLC3A2P08195 630 aaKnown RBP24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 SKAP1Q86WV1 359 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 GMCL1P1Q8NEA9 526 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 SHISA4Q96DD7 197 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 MOV10L1Q9BXT6 1211 aaKnown RBP24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 GOPCQ9HD26 462 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 DIAPH3Q9NSV4 1193 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 ZNF236Q9UL36 1845 aa24.49■■□□□ 1.51
PKNOX1-202ENST00000418336 FLOT1O75955 427 aa24.48■■□□□ 1.51
PKNOX1-202ENST00000418336 IGHA2P01877 340 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms