RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 JAG2Q9Y219 1238 aa13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 A0A1B0GTH6 734 aa13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PPP2R3AQ06190 1150 aa13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 NMT2O60551 498 aa13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CLCN6P51797 869 aa13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PANX2Q96RD6 677 aa13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 DCP1AQ9NPI6 582 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 MYO5AQ9Y4I1 1855 aaKnown RBP13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TEX33O43247 280 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 STAT6P42226 847 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 NSUN4Q96CB9 384 aaKnown RBP13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 RBL2Q08999 1139 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 STIM1Q13586 685 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ITGB4P16144 1822 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ORC4O43929 436 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ATP2C1P98194 919 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PAK1Q13153 545 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 LRRN4CLQ8ND94 238 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 A0A087X0B3 334 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 UBA7P41226 1012 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 GNAQP50148 359 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 DPYDQ12882 1025 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TPTE2Q6XPS3 522 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ZNF444Q8N0Y2 327 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 WDR24Q96S15 920 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 SOWAHDA6NJG2 315 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 KCNQ2O43526 872 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 H2AFXP16104 143 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PRDX5P30044 214 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TFAP4Q01664 338 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 FUT2Q10981 343 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 VPS16Q9H269 839 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 DTHD1Q6ZMT9 781 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TMEM139Q8IV31 216 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 GOLGA1Q92805 767 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ZSWIM4Q9H7M6 989 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ANKRD36CQ5JPF3 1778 aa13.23□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CNTNAP5Q8WYK1 1306 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TADA3O75528 432 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 KCNQ4P56696 695 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 MAGEC2Q9UBF1 373 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 BAG3O95817 575 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TSPY3P0CV98 308 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TSPY8P0CW00 308 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CYP2D6P10635 497 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CASP14P31944 242 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 FBXO33Q7Z6M2 555 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CCDC24Q8N4L8 307 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 GPR161Q8N6U8 529 aaKnown RBP13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 PNMA1Q8ND90 353 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CCDC148Q8NFR7 591 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CCDC51Q96ER9 411 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ARFGAP3Q9NP61 516 aa13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 COBLO75128 1261 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 LONP1P36776 959 aaKnown RBP13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 MTF1Q14872 753 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 NELFBQ8WX92 580 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CUL4BQ13620 913 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 WWC2Q6AWC2 1192 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 TMTC1Q8IUR5 882 aa13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
CSPG4P3Y-201ENST00000418188 ABCA3Q99758 1704 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MFAP3LO75121 409 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MAP3K9P80192 1104 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 UBXN1Q04323 297 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ARL6IP4Q66PJ3 421 aaKnown RBP13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ZNF287Q9HBT7 754 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TAB2Q9NYJ8 693 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TTF2Q9UNY4 1162 aaKnown RBP13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LRP5O75197 1615 aa13.21□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CTAGE9A4FU28 777 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms