RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SEPT2Q15019 361 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SNX17Q15036 470 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 C9orf50Q5SZB4 431 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ABRAQ8N0Z2 381 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MB21D1Q8N884 522 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TANGO6Q9C0B7 1094 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SPATC1LQ9H0A9 340 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 CCDC8Q9H0W5 538 aaPredicted RBP9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MROH8Q9H579 483 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 DBNLQ9UJU6 430 aaKnown RBP9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TACC3Q9Y6A5 838 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 DNAH12Q6ZR08 3092 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 COBLO75128 1261 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PLS1Q14651 629 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 LRRC41Q15345 812 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TRIM60Q495X7 471 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ANO1Q5XXA6 986 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 FERMT2Q96AC1 680 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PDLIM7Q9NR12 457 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 NOP58Q9Y2X3 529 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 UNC80Q8N2C7 3258 aa9.55□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ZNF236Q9UL36 1845 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TMEM265A0A087WTH1 108 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MAGEB6P1A0A0J9YX57 407 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TRIM43BA6NCK2 446 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 FCER1AP12319 257 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 DSG3P32926 999 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 GUCY1A2P33402 732 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TLE2Q04725 743 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 GABPAQ06546 454 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PRAMEF19Q5SWL8 479 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ZKSCAN2Q63HK3 967 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 NCAPG2Q86XI2 1143 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TMEM57Q8N5G2 664 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MYLIPQ8WY64 445 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TRIM43Q96BQ3 446 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 EAF2Q96CJ1 260 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 CRNKL1Q9BZJ0 848 aaKnown RBP9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TTYH1Q9H313 450 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MCM9Q9NXL9 1143 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 NRBP1Q9UHY1 535 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TNNQ9UQP3 1299 aa9.54□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MYO9BQ13459 2157 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 A0A1W2PRG0 241 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 FLOT1O75955 427 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SLC25A27O95847 323 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 CLTBP09497 229 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 RARBP10826 455 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 FOSL2P15408 326 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TTF1Q15361 905 aaPredicted RBP9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TMEM179Q6ZVK1 233 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 RNF180Q86T96 592 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MAML3Q96JK9 1138 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 RNPC3Q96LT9 517 aaKnown RBP9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 RIOK1Q9BRS2 568 aaKnown RBP9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ANTXR1Q9H6X2 564 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SH2D4AQ9H788 454 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 XPNPEP3Q9NQH7 507 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PHF24Q9UPV7 400 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TTC28Q96AY4 2481 aa9.53□□□□□ -0.88
HLA-DPA1-241ENST00000417724 KIAA0355O15063 1070 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 RAG1P15918 1043 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 FAM47AQ5JRC9 791 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SLC9C2Q5TAH2 1124 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ERC1Q8IUD2 1116 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ATG4CQ96DT6 458 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TMX2Q9Y320 296 aa9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
HLA-DPA1-241ENST00000417724 MYH8P13535 1937 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 FPGSQ05932 587 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 KCTD2Q14681 263 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 KIAA1755Q5JYT7 1200 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 AACSQ86V21 672 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SPICE1Q8N0Z3 855 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CCDC17Q96LX7 622 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TOX2Q96NM4 488 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TINF2Q9BSI4 451 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 VCPKMTQ9H867 229 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DCP1AQ9NPI6 582 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TMEM39AQ9NV64 488 aa9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DIS3Q9Y2L1 958 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-241ENST00000417724 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 WDR46O15213 610 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PGK1P00558 417 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PDE6AP16499 860 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms