RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MBD4O95243 580 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 COG2Q14746 738 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 TMEM179Q6ZVK1 233 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 NPLOC4Q8TAT6 608 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 LRCH3Q96II8 777 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 ATP8A2Q9NTI2 1148 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 HOXC10Q9NYD6 342 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 SWAP70Q9UH65 585 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 IVNS1ABPQ9Y6Y0 642 aa17.9■□□□□ 0.46
RPS28-201ENST00000417088 CHGBP05060 677 aa17.89■□□□□ 0.45
RPS28-201ENST00000417088 ATP2B2Q01814 1243 aa17.89■□□□□ 0.45
RPS28-201ENST00000417088 HAUS7Q99871 368 aa17.89■□□□□ 0.45
RPS28-201ENST00000417088 MOV10L1Q9BXT6 1211 aaKnown RBP17.89■□□□□ 0.45
RPS28-201ENST00000417088 SMIM22K7EJ46 135 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 IGHA2P01877 340 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 AKR1B1P15121 316 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
RPS28-201ENST00000417088 LRRC26Q2I0M4 334 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 CLEC10AQ8IUN9 316 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 TANGO6Q9C0B7 1094 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.88■□□□□ 0.454e-7■□□□□ 10.3
RPS28-201ENST00000417088 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
RPS28-201ENST00000417088 TMX2Q9Y320 296 aa17.88■□□□□ 0.45
RPS28-201ENST00000417088 CYP2D7A0A087X1C5 515 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 DSG3P32926 999 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 CYP2C19P33261 490 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 UBE3CQ15386 1083 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 C12orf60Q5U649 245 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 SPATC1LQ9H0A9 340 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 DDX20Q9UHI6 824 aaKnown RBP17.87■□□□□ 0.45
RPS28-201ENST00000417088 RCAN3Q9UKA8 241 aa17.87■□□□□ 0.45
RPS28-201ENST00000417088 USP17L12C9JPN9 530 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 USP17L21D6R901 530 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 STRNO43815 780 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 ERCC3P19447 782 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 ADORA2AP29274 412 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 CNGA1P29973 690 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 CDK8P49336 464 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 ICA1Q05084 483 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 SHCBP1Q8NEM2 672 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 TRPV1Q8NER1 839 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 LPAR1Q92633 364 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 CCDC17Q96LX7 622 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 ARHGEF10LQ9HCE6 1279 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 RLFQ13129 1914 aa17.86■□□□□ 0.45
RPS28-201ENST00000417088 MSCO60682 206 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 C20orf194Q5TEA3 1177 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 C16orf86Q6ZW13 317 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 DPP9Q86TI2 863 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 SPICE1Q8N0Z3 855 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 MB21D1Q8N884 522 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 ATG4CQ96DT6 458 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
RPS28-201ENST00000417088 BAZ2AQ9UIF9 1905 aaKnown RBP17.84■□□□□ 0.45
RPS28-201ENST00000417088 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
RPS28-201ENST00000417088 COBLO75128 1261 aa17.84■□□□□ 0.45
RPS28-201ENST00000417088 FLOT1O75955 427 aa17.84■□□□□ 0.45
RPS28-201ENST00000417088 CYBAP13498 195 aa17.84■□□□□ 0.45
RPS28-201ENST00000417088 OLFML2BQ68BL8 750 aa17.84■□□□□ 0.45
RPS28-201ENST00000417088 SENP6Q9GZR1 1112 aaPredicted RBP17.84■□□□□ 0.45
RPS28-201ENST00000417088 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
RPS28-201ENST00000417088 SH2D4AQ9H788 454 aa17.84■□□□□ 0.45
RPS28-201ENST00000417088 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
RPS28-201ENST00000417088 PLS1Q14651 629 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 LRIT3Q3SXY7 679 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 ZSCAN25Q6NSZ9 544 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 CTR9Q6PD62 1173 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 TDHQ8IZJ6 230 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 UBE2OQ9C0C9 1292 aaKnown RBP17.83■□□□□ 0.44
RPS28-201ENST00000417088 MROH8Q9H579 483 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 A0A0G2JMZ2 1700 aa17.83■□□□□ 0.44
RPS28-201ENST00000417088 FRMPD3Q5JV73 1810 aa17.82■□□□□ 0.44
RPS28-201ENST00000417088 WDR46O15213 610 aaKnown RBP17.82■□□□□ 0.44
RPS28-201ENST00000417088 EEF2P13639 858 aaKnown RBP17.82■□□□□ 0.44
RPS28-201ENST00000417088 NCAPG2Q86XI2 1143 aa17.82■□□□□ 0.44
RPS28-201ENST00000417088 ABRAQ8N0Z2 381 aa17.82■□□□□ 0.44
RPS28-201ENST00000417088 ZNF236Q9UL36 1845 aa17.82■□□□□ 0.44
RPS28-201ENST00000417088 MYH8P13535 1937 aa17.81■□□□□ 0.44
RPS28-201ENST00000417088 DNM1LO00429 736 aa17.81■□□□□ 0.44
RPS28-201ENST00000417088 TMEM132BQ14DG7 1078 aa17.81■□□□□ 0.44
RPS28-201ENST00000417088 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
RPS28-201ENST00000417088 SAMD1Q6SPF0 538 aaPredicted RBP17.81■□□□□ 0.44
RPS28-201ENST00000417088 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
RPS28-201ENST00000417088 ADAMTS5Q9UNA0 930 aa17.81■□□□□ 0.44
RPS28-201ENST00000417088 ATN1P54259 1190 aaPredicted RBP17.8■□□□□ 0.44
RPS28-201ENST00000417088 MDM2Q00987 491 aaPredicted RBP17.8■□□□□ 0.44
RPS28-201ENST00000417088 GJC2Q5T442 439 aaPredicted RBP17.8■□□□□ 0.44
RPS28-201ENST00000417088 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
RPS28-201ENST00000417088 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPS28-201ENST00000417088 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
RPS28-201ENST00000417088 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
RPS28-201ENST00000417088 SLC5A4Q9NY91 659 aa17.8■□□□□ 0.44
RPS28-201ENST00000417088 MYH7P12883 1935 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 SEPT4O43236 478 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 SLC25A27O95847 323 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms