RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 TTC6Q86TZ1 520 aa16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 YTHDC1Q96MU7 727 aaKnown RBP16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 MOV10L1Q9BXT6 1211 aaKnown RBP16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 PRDM5Q9NQX1 630 aaPredicted RBP16.05■□□□□ 0.16
CTHRC1-202ENST00000415886 NAV1Q8NEY1 1877 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 EVX2Q03828 476 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 SEPT2Q15019 361 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 SLC39A5Q6ZMH5 540 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 CDX2Q99626 313 aaPredicted RBP16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 A0A0G2JMZ2 1700 aa16.04■□□□□ 0.16
CTHRC1-202ENST00000415886 A0A1W2PRG0 241 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 ARRDC4Q8NCT1 418 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 BADQ92934 168 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 EXOC6BQ9Y2D4 811 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 UNC80Q8N2C7 3258 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
CTHRC1-202ENST00000415886 APBB1O00213 710 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 SEPT4O43236 478 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 COBLO75128 1261 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 POLR3DP05423 398 aaPredicted RBP16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 ERCC3P19447 782 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 GABPAQ06546 454 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 COG2Q14746 738 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 SNX17Q15036 470 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 TANGO6Q9C0B7 1094 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 PDLIM7Q9NR12 457 aa16.02■□□□□ 0.16
CTHRC1-202ENST00000415886 STRNO43815 780 aa16.01■□□□□ 0.15
CTHRC1-202ENST00000415886 KIAA1755Q5JYT7 1200 aa16.01■□□□□ 0.15
CTHRC1-202ENST00000415886 SH3RF1Q7Z6J0 888 aa16.01■□□□□ 0.15
CTHRC1-202ENST00000415886 AACSQ86V21 672 aa16.01■□□□□ 0.15
CTHRC1-202ENST00000415886 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
CTHRC1-202ENST00000415886 TRIM43BA6NCK2 446 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 RAB11FIP3O75154 756 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 ADCYAP1R1P41586 468 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 PLS1Q14651 629 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 LRRC41Q15345 812 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 CLASRPQ8N2M8 674 aaKnown RBP16■□□□□ 0.15
CTHRC1-202ENST00000415886 SHCBP1Q8NEM2 672 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 MYLIPQ8WY64 445 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 TRIM43Q96BQ3 446 aaPredicted RBP16■□□□□ 0.15
CTHRC1-202ENST00000415886 TTYH1Q9H313 450 aaPredicted RBP16■□□□□ 0.15
CTHRC1-202ENST00000415886 HOXC10Q9NYD6 342 aa16■□□□□ 0.15
CTHRC1-202ENST00000415886 MAGEB6P1A0A0J9YX57 407 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 SMAD3P84022 425 aaKnown RBP15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 C20orf194Q5TEA3 1177 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 NCAPG2Q86XI2 1143 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 CLEC10AQ8IUN9 316 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 MCM9Q9NXL9 1143 aa15.99■□□□□ 0.15
CTHRC1-202ENST00000415886 IFIT2P09913 472 aaKnown RBP15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 CYP2D6P10635 497 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 DSG3P32926 999 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 SPICE1Q8N0Z3 855 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 RHPN1Q8TCX5 695 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 SDR42E1Q8WUS8 393 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 ATG4CQ96DT6 458 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 MAML3Q96JK9 1138 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 CRNKL1Q9BZJ0 848 aaKnown RBP15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 SLC5A4Q9NY91 659 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 CUL9Q8IWT3 2517 aa15.98■□□□□ 0.15
CTHRC1-202ENST00000415886 DNAH12Q6ZR08 3092 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 FLOT1O75955 427 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 PDE6AP16499 860 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 ITGB8P26012 769 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 TLE2Q04725 743 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 C1orf53Q5VUE5 145 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 TMED8Q6PL24 325 aaPredicted RBP15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 MB21D1Q8N884 522 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 MROH8Q9H579 483 aa15.97■□□□□ 0.15
CTHRC1-202ENST00000415886 FOSL2P15408 326 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 EPHB4P54760 987 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 SLC9C2Q5TAH2 1124 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 TMEM179Q6ZVK1 233 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 ABRAQ8N0Z2 381 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 LCORLQ8N3X6 602 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 DYNLL2Q96FJ2 89 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 RNPC3Q96LT9 517 aaKnown RBP15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 DCP1AQ9NPI6 582 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms