RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 RESTQ13127 1097 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 TATDN1Q6P1N9 297 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 TMEM179Q6ZVK1 233 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 METTL16Q86W50 562 aaKnown RBP13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 RBM27Q9P2N5 1060 aaKnown RBP13.47□□□□□ -0.25
SNRNP35-202ENST00000412157 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 NOVP48745 357 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 ABCB5Q2M3G0 1257 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 NBPF11Q86T75 865 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 LZTS2Q9BRK4 669 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 MTMR7Q9Y216 660 aa13.46□□□□□ -0.25
SNRNP35-202ENST00000412157 DOCK1Q14185 1865 aa13.46□□□□□ -0.26
SNRNP35-202ENST00000412157 BAZ2BQ9UIF8 2168 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 PARP1P09874 1014 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 LMOD1P29536 600 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 KRT40Q6A162 431 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 APOBEC3FQ8IUX4 373 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 GPRC5DQ9NZD1 345 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-202ENST00000412157 FIBPO43427 364 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 TBC1D12O60347 775 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 GDF11O95390 407 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 ICA1Q05084 483 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 ASPRV1Q53RT3 343 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 SRBD1Q8N5C6 995 aaKnown RBP13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 ZNF396Q96N95 335 aaPredicted RBP13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 CNPY2Q9Y2B0 182 aa13.44□□□□□ -0.26
SNRNP35-202ENST00000412157 TRAK2O60296 914 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 SLURP2P0DP57 97 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 FUT2Q10981 343 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 RASA3Q14644 834 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 ATL3Q6DD88 541 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 TMEM87AQ8NBN3 555 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 CFAP45Q9UL16 551 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 SCN4AP35499 1836 aa13.43□□□□□ -0.26
SNRNP35-202ENST00000412157 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 KLRF2D3W0D1 207 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 MBD3O95983 291 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 EGFRP00533 1210 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 GH2P01242 217 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 PDHBP11177 359 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 GUCY1A2P33402 732 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 SEPT2Q15019 361 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 CCDC96Q2M329 555 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 BRMS1Q9HCU9 246 aa13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 V9GY48 417 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-202ENST00000412157 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 MMP1P03956 469 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 SCG2P13521 617 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 SMARCA1P28370 1054 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 PKN1Q16512 942 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 PFKFB3Q16875 520 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 MKL1Q969V6 931 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms