RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
LINC00963-201ENST00000412141 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.19
LINC00963-201ENST00000412141 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
LINC00963-201ENST00000412141 GLRX3O76003 335 aaKnown RBP13.89□□□□□ -0.19
LINC00963-201ENST00000412141 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
LINC00963-201ENST00000412141 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
LINC00963-201ENST00000412141 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
LINC00963-201ENST00000412141 PLS1Q14651 629 aa13.89□□□□□ -0.19
LINC00963-201ENST00000412141 COG2Q14746 738 aa13.89□□□□□ -0.19
LINC00963-201ENST00000412141 TRIB2Q92519 343 aa13.89□□□□□ -0.19
LINC00963-201ENST00000412141 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
LINC00963-201ENST00000412141 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00963-201ENST00000412141 MYH7P12883 1935 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 H0YGN5 161 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 PRDM1O75626 825 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 FLOT1O75955 427 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 CCNA1P78396 465 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 LRRFIP1Q32MZ4 808 aaKnown RBP13.88□□□□□ -0.19
LINC00963-201ENST00000412141 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 EPB41L4AQ9HCS5 686 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-201ENST00000412141 HMX1Q9NP08 348 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-201ENST00000412141 ARPP21Q9UBL0 812 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-201ENST00000412141 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
LINC00963-201ENST00000412141 SZT2Q5T011 3432 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
LINC00963-201ENST00000412141 ZKSCAN1P17029 563 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-201ENST00000412141 RGS2P41220 211 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 MORN1Q5T089 497 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 SOCS4Q8WXH5 440 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-201ENST00000412141 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 IVNS1ABPQ9Y6Y0 642 aa13.87□□□□□ -0.19
LINC00963-201ENST00000412141 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 GNAT2P19087 354 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 RASA1P20936 1047 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 MAP2K5Q13163 448 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 LBX2Q6XYB7 198 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 IFNL3Q8IZI9 196 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 DIS3LQ8TF46 1054 aaKnown RBP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 USP6NLQ92738 828 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 CHMP4CQ96CF2 233 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 PAWRQ96IZ0 340 aaKnown RBP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 NUP88Q99567 741 aaPredicted RBP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 LNPKQ9C0E8 428 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 FBXO28Q9NVF7 368 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 RANBP2P49792 3224 aaKnown RBP13.86□□□□□ -0.19
LINC00963-201ENST00000412141 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
LINC00963-201ENST00000412141 TRIOBPQ9H2D6 2365 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 XRCC5P13010 732 aaKnown RBP13.85□□□□□ -0.19
LINC00963-201ENST00000412141 PTPREP23469 700 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 DSG3P32926 999 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 CACNB2Q08289 660 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-201ENST00000412141 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-201ENST00000412141 ZMYM1Q5SVZ6 1142 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 ZNF444Q8N0Y2 327 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-201ENST00000412141 LPAR1Q92633 364 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 HTATIP2Q9BUP3 242 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 SPATC1LQ9H0A9 340 aa13.85□□□□□ -0.19
LINC00963-201ENST00000412141 COLQQ9Y215 455 aaPredicted RBP13.85□□□□□ -0.19
LINC00963-201ENST00000412141 SLC15A5A6NIM6 579 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 ERCC3P19447 782 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
LINC00963-201ENST00000412141 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC00963-201ENST00000412141 PDE1AP54750 535 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 UBE2Q1Q7Z7E8 422 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 DPP9Q86TI2 863 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 APBA2Q99767 749 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 NAPBQ9H115 298 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 FLRT1Q9NZU1 646 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 PLXNB2O15031 1838 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 SALL3Q9BXA9 1300 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 MYH8P13535 1937 aa13.84□□□□□ -0.19
LINC00963-201ENST00000412141 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 WDR46O15213 610 aaKnown RBP13.83□□□□□ -0.2
LINC00963-201ENST00000412141 IGHDP01880 384 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 CNGA1P29973 690 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 CYP2C19P33261 490 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 FAM47AQ5JRC9 791 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 MFSD14CQ5VZR4 134 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 TRMT44Q8IYL2 757 aaKnown RBP13.83□□□□□ -0.2
LINC00963-201ENST00000412141 NPLOC4Q8TAT6 608 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
LINC00963-201ENST00000412141 INCENPQ9NQS7 918 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms