RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 KCNF1Q9H3M0 494 aa28.15■■■□□ 2.1
VRK2-202ENST00000412104 SUGT1Q9Y2Z0 365 aa28.15■■■□□ 2.1
VRK2-202ENST00000412104 PNOCQ13519 176 aa28.14■■■□□ 2.1
VRK2-202ENST00000412104 METTL16Q86W50 562 aaKnown RBP28.14■■■□□ 2.1
VRK2-202ENST00000412104 EYA3Q99504 573 aa28.14■■■□□ 2.1
VRK2-202ENST00000412104 MAD2L2Q9UI95 211 aa28.14■■■□□ 2.1
VRK2-202ENST00000412104 VEGFAP15692 232 aaPredicted RBP28.14■■■□□ 2.09
VRK2-202ENST00000412104 CDC25BP30305 580 aa28.14■■■□□ 2.09
VRK2-202ENST00000412104 MSL1Q68DK7 614 aa28.14■■■□□ 2.09
VRK2-202ENST00000412104 CNNM3Q8NE01 707 aa28.14■■■□□ 2.09
VRK2-202ENST00000412104 TMEM47Q9BQJ4 181 aa28.14■■■□□ 2.09
VRK2-202ENST00000412104 STX8Q9UNK0 236 aa28.14■■■□□ 2.09
VRK2-202ENST00000412104 NLRP5P59047 1200 aa28.13■■■□□ 2.09
VRK2-202ENST00000412104 NOM1Q5C9Z4 860 aaKnown RBP28.13■■■□□ 2.09
VRK2-202ENST00000412104 DRC7Q8IY82 874 aa28.13■■■□□ 2.09
VRK2-202ENST00000412104 CERS5Q8N5B7 392 aa28.13■■■□□ 2.09
VRK2-202ENST00000412104 GNAQP50148 359 aa28.12■■■□□ 2.09
VRK2-202ENST00000412104 RGPD3A6NKT7 1758 aaPredicted RBP28.12■■■□□ 2.09
VRK2-202ENST00000412104 RGPD4Q7Z3J3 1758 aa28.12■■■□□ 2.09
VRK2-202ENST00000412104 F8W031 263 aaPredicted RBP28.12■■■□□ 2.09
VRK2-202ENST00000412104 WNT7AO00755 349 aa28.12■■■□□ 2.09
VRK2-202ENST00000412104 ELOA2Q8IYF1 753 aaPredicted RBP28.12■■■□□ 2.09
VRK2-202ENST00000412104 NAP1L5Q96NT1 182 aaPredicted RBP28.12■■■□□ 2.09
VRK2-202ENST00000412104 PTGS1P23219 599 aa28.11■■■□□ 2.09
VRK2-202ENST00000412104 DOK7Q18PE1 504 aa28.11■■■□□ 2.09
VRK2-202ENST00000412104 NEDD1Q8NHV4 660 aa28.11■■■□□ 2.09
VRK2-202ENST00000412104 MRFAP1L1Q96HT8 127 aa28.11■■■□□ 2.09
VRK2-202ENST00000412104 CSRNP2Q9H175 543 aa28.11■■■□□ 2.09
VRK2-202ENST00000412104 CLIP2Q9UDT6 1046 aa28.11■■■□□ 2.09
VRK2-202ENST00000412104 BMP15O95972 392 aa28.1■■■□□ 2.09
VRK2-202ENST00000412104 TMX4Q9H1E5 349 aaPredicted RBP28.1■■■□□ 2.09
VRK2-202ENST00000412104 ADAMTSL1Q8N6G6 1762 aa28.1■■■□□ 2.09
VRK2-202ENST00000412104 TTC38Q5R3I4 469 aa28.1■■■□□ 2.09
VRK2-202ENST00000412104 SH3GLB2Q9NR46 395 aa28.1■■■□□ 2.09
VRK2-202ENST00000412104 TTF2Q9UNY4 1162 aaKnown RBP28.1■■■□□ 2.09
VRK2-202ENST00000412104 RXRBP28702 533 aa28.09■■■□□ 2.09
VRK2-202ENST00000412104 SLC35G1Q2M3R5 365 aa28.09■■■□□ 2.09
VRK2-202ENST00000412104 CCDC186Q7Z3E2 898 aa28.09■■■□□ 2.09
VRK2-202ENST00000412104 GPKOWQ92917 476 aaPredicted RBP eCLIP28.09■■■□□ 2.09
VRK2-202ENST00000412104 MXD3Q9BW11 206 aa28.09■■■□□ 2.09
VRK2-202ENST00000412104 PALM3A6NDB9 673 aaPredicted RBP28.08■■■□□ 2.09
VRK2-202ENST00000412104 POLR2DO15514 142 aaKnown RBP28.08■■■□□ 2.09
VRK2-202ENST00000412104 ISM2Q6H9L7 571 aa28.08■■■□□ 2.09
VRK2-202ENST00000412104 ZNF622Q969S3 477 aaKnown RBP eCLIP28.08■■■□□ 2.09
VRK2-202ENST00000412104 NRBP1Q9UHY1 535 aa28.08■■■□□ 2.09
VRK2-202ENST00000412104 MTMR7Q9Y216 660 aa28.08■■■□□ 2.09
VRK2-202ENST00000412104 CALML3P27482 149 aa28.08■■■□□ 2.09
VRK2-202ENST00000412104 MDM2Q00987 491 aaPredicted RBP28.08■■■□□ 2.09
VRK2-202ENST00000412104 PICALMQ13492 652 aa28.08■■■□□ 2.09
VRK2-202ENST00000412104 PIK3AP1Q6ZUJ8 805 aa28.08■■■□□ 2.09
VRK2-202ENST00000412104 HOOK1Q9UJC3 728 aaKnown RBP28.08■■■□□ 2.09
VRK2-202ENST00000412104 ADAMTS3O15072 1205 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 FOXN1O15353 648 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 CYTH3O43739 400 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 ZNF174Q15697 407 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 USP49Q70CQ1 688 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 FOXP4Q8IVH2 680 aaPredicted RBP28.07■■■□□ 2.08
VRK2-202ENST00000412104 FERMT2Q96AC1 680 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 SERTAD1Q9UHV2 236 aa28.07■■■□□ 2.08
VRK2-202ENST00000412104 TRAPPC10P48553 1259 aa28.06■■■□□ 2.08
VRK2-202ENST00000412104 PCDHA5Q9Y5H7 936 aa28.06■■■□□ 2.08
VRK2-202ENST00000412104 C2CD5Q86YS7 1000 aa28.06■■■□□ 2.08
VRK2-202ENST00000412104 CEP95Q96GE4 821 aa28.06■■■□□ 2.08
VRK2-202ENST00000412104 LZTS2Q9BRK4 669 aa28.06■■■□□ 2.08
VRK2-202ENST00000412104 PYCARDQ9ULZ3 195 aa28.06■■■□□ 2.08
VRK2-202ENST00000412104 MYH8P13535 1937 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 G3V3G9 751 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 NCAPHQ15003 741 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 POSTNQ15063 836 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 DCAF8Q5TAQ9 597 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 RASGRP2Q7LDG7 609 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 BLIDQ8IZY5 108 aa28.05■■■□□ 2.08
VRK2-202ENST00000412104 C17orf53Q8N3J3 647 aaPredicted RBP28.05■■■□□ 2.08
VRK2-202ENST00000412104 DDX4Q9NQI0 724 aaKnown RBP28.05■■■□□ 2.08
VRK2-202ENST00000412104 SMTNL1A8MU46 457 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 ACTN4O43707 911 aaKnown RBP28.04■■■□□ 2.08
VRK2-202ENST00000412104 SCNN1DP51172 638 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 ATP2C1P98194 919 aaPredicted RBP28.04■■■□□ 2.08
VRK2-202ENST00000412104 NOLC1Q14978 699 aaKnown RBP eCLIP28.04■■■□□ 2.08
VRK2-202ENST00000412104 TYW1BQ6NUM6 668 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 PDILTQ8N807 584 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 KIAA1524Q8TCG1 905 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 PCDHA4Q9UN74 947 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 PLIN4Q96Q06 1357 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 IKBKBO14920 756 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 GOLGA8HP0CJ92 632 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 WWC2Q6AWC2 1192 aa28.04■■■□□ 2.08
VRK2-202ENST00000412104 TOP1P11387 765 aaKnown RBP28.03■■■□□ 2.08
VRK2-202ENST00000412104 NOVP48745 357 aa28.03■■■□□ 2.08
VRK2-202ENST00000412104 GABPAQ06546 454 aa28.03■■■□□ 2.08
VRK2-202ENST00000412104 PTGDRQ13258 359 aa28.03■■■□□ 2.08
VRK2-202ENST00000412104 CCDC144BQ3MJ40 725 aa28.03■■■□□ 2.08
VRK2-202ENST00000412104 KLRF2D3W0D1 207 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 PRR29P0C7W0 189 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 TPM4P67936 248 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 CCDC148Q8NFR7 591 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 EPSTI1Q96J88 318 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 SPZ1Q9BXG8 430 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 SPTLC3Q9NUV7 552 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 USP40Q9NVE5 1235 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms