RNA–Protein interactions for RNA: ENST00000411577.5

ERGIC3-204, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-204ENST00000411577 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 NEDD1Q8NHV4 660 aa10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 P2RX7Q99572 595 aaKnown RBP10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
ERGIC3-204ENST00000411577 ZNF213O14771 459 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 ORC4O43929 436 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 PRDM1O75626 825 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 VCAM1P19320 739 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 PSMC4P43686 418 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 TFAP4Q01664 338 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 MKL1Q969V6 931 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 RNF41Q9H4P4 317 aaPredicted RBP10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 GOPCQ9HD26 462 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 HOXC10Q9NYD6 342 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 PTPN22Q9Y2R2 807 aa10.93□□□□□ -0.66
ERGIC3-204ENST00000411577 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 TSPY2A6NKD2 308 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 WDR46O15213 610 aaKnown RBP10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 FMNL1O95466 1100 aaPredicted RBP10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 TTLL1O95922 423 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 FCGRTP55899 365 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 HERVK_113P62684 666 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 RPAP3Q9H6T3 665 aaPredicted RBP10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 MTMR4Q9NYA4 1195 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 MORF4L1Q9UBU8 362 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 CLIP2Q9UDT6 1046 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 RABGAP1Q9Y3P9 1069 aa10.92□□□□□ -0.66
ERGIC3-204ENST00000411577 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 SGSM2O43147 1006 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 RANBP6O60518 1105 aaKnown RBP10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 FXR1P51114 621 aaKnown RBP eCLIP10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 COG2Q14746 738 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 IMMTQ16891 758 aaKnown RBP10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 FAM47AQ5JRC9 791 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 LBX2Q6XYB7 198 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 CEP95Q96GE4 821 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 INCENPQ9NQS7 918 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 TCP11L1Q9NUJ3 509 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 RBPJLQ9UBG7 517 aa10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 BAZ2AQ9UIF9 1905 aaKnown RBP10.91□□□□□ -0.66
ERGIC3-204ENST00000411577 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 F5H6K3 240 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 HAND2P61296 217 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 CCNA1P78396 465 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 KLRC3Q07444 240 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 KIAA1211Q6ZU35 1233 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 ESR2Q92731 530 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 COA7Q96BR5 231 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 TANGO6Q9C0B7 1094 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 ARHGAP39Q9C0H5 1083 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 SRRDQ9UH36 339 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 HPS5Q9UPZ3 1129 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 ATAD5Q96QE3 1844 aa10.9□□□□□ -0.66
ERGIC3-204ENST00000411577 CUL9Q8IWT3 2517 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 RAD21O60216 631 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 CTGFP29279 349 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 ERVK-24P63145 666 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 CAP1Q01518 475 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 RRP12Q5JTH9 1297 aaKnown RBP10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 KIAA1755Q5JYT7 1200 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 CASC1Q6TDU7 716 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 NBPF11Q86T75 865 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 SPICE1Q8N0Z3 855 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 MB21D1Q8N884 522 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 TTC14Q96N46 770 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
ERGIC3-204ENST00000411577 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 FLOT1O75955 427 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 MAPK4P31152 587 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 NOVP48745 357 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 Q3C1V9 767 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 TBC1D10CQ8IV04 446 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 RAET1EQ8TD07 263 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 MAP4K1Q92918 833 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 KRT23Q9C075 422 aa10.88□□□□□ -0.67
ERGIC3-204ENST00000411577 NBPF3Q9H094 633 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms