RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 INHAP05111 366 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 EEF2P13639 858 aaKnown RBP21.17■□□□□ 0.98
LSM5-204ENST00000409909 UBXN2AP68543 259 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 LBX2Q6XYB7 198 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 CCDC129Q6ZRS4 1044 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 CHD1LQ86WJ1 897 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 UNC93B1Q9H1C4 597 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 KANSL2Q9H9L4 492 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 ARHGEF10LQ9HCE6 1279 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 BTBD7Q9P203 1132 aa21.17■□□□□ 0.98
LSM5-204ENST00000409909 RLFQ13129 1914 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 MAPK4P31152 587 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 SPICE1Q8N0Z3 855 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 SHISA4Q96DD7 197 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 RNF208Q9H0X6 261 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 VCPKMTQ9H867 229 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 MKNK2Q9HBH9 465 aa21.16■□□□□ 0.98
LSM5-204ENST00000409909 GREB1LQ9C091 1923 aaPredicted RBP21.16■□□□□ 0.98
LSM5-204ENST00000409909 GJB1P08034 283 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 ATP2B2Q01814 1243 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 COG2Q14746 738 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 PLEKHM2Q8IWE5 1019 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 LPAR1Q92633 364 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 NACAP1Q9BZK3 213 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 TANGO6Q9C0B7 1094 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 SH2D4AQ9H788 454 aa21.15■□□□□ 0.98
LSM5-204ENST00000409909 PRDM1O75626 825 aa21.14■□□□□ 0.97
LSM5-204ENST00000409909 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.97
LSM5-204ENST00000409909 GPR142Q7Z601 462 aa21.14■□□□□ 0.97
LSM5-204ENST00000409909 USP6NLQ92738 828 aa21.14■□□□□ 0.97
LSM5-204ENST00000409909 HOXC10Q9NYD6 342 aa21.14■□□□□ 0.97
LSM5-204ENST00000409909 CYP2B6P20813 491 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 GJA8P48165 433 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 MORN1Q5T089 497 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 VPS53Q5VIR6 699 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 PLEKHH3Q7Z736 793 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 CCAR1Q8IX12 1150 aaKnown RBP21.13■□□□□ 0.97
LSM5-204ENST00000409909 FAM227BQ96M60 508 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 NUDT12Q9BQG2 462 aa21.13■□□□□ 0.97
LSM5-204ENST00000409909 CCNA1P78396 465 aa21.12■□□□□ 0.97
LSM5-204ENST00000409909 TRIM32Q13049 653 aa21.12■□□□□ 0.97
LSM5-204ENST00000409909 NAPBQ9H115 298 aa21.12■□□□□ 0.97
LSM5-204ENST00000409909 OSBPL3Q9H4L5 887 aa21.12■□□□□ 0.97
LSM5-204ENST00000409909 HELLSQ9NRZ9 838 aa21.12■□□□□ 0.97
LSM5-204ENST00000409909 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 A0A0D9SFI3 127 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 WDR46O15213 610 aaKnown RBP21.11■□□□□ 0.97
LSM5-204ENST00000409909 HMGCRP04035 888 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 XRCC5P13010 732 aaKnown RBP21.11■□□□□ 0.97
LSM5-204ENST00000409909 DSG3P32926 999 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 PPARAQ07869 468 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 ZNF444Q8N0Y2 327 aaPredicted RBP21.11■□□□□ 0.97
LSM5-204ENST00000409909 SOCS4Q8WXH5 440 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 TRIB2Q92519 343 aa21.11■□□□□ 0.97
LSM5-204ENST00000409909 TRIM6-TRIM34B2RNG4 842 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 FLOT1O75955 427 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 TICAM2Q86XR7 235 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 NKX2-3Q8TAU0 364 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 U2AF1L4Q8WU68 220 aaKnown RBP21.1■□□□□ 0.97
LSM5-204ENST00000409909 ZNF287Q9HBT7 754 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 GOPCQ9HD26 462 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 PAK6Q9NQU5 681 aaPredicted RBP21.1■□□□□ 0.97
LSM5-204ENST00000409909 NYAP2Q9P242 653 aa21.1■□□□□ 0.97
LSM5-204ENST00000409909 A0A0G2JMZ2 1700 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 PARP14Q460N5 1801 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 SGPL1O95470 568 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 NMIQ13287 307 aaPredicted RBP21.09■□□□□ 0.97
LSM5-204ENST00000409909 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 RILPL2Q969X0 211 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 ATG4CQ96DT6 458 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 DEFB118Q96PH6 123 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 MOV10L1Q9BXT6 1211 aaKnown RBP21.09■□□□□ 0.97
LSM5-204ENST00000409909 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 FBXO28Q9NVF7 368 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
LSM5-204ENST00000409909 RAD21O60216 631 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 PTPREP23469 700 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 RGS2P41220 211 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 CTDSPL2Q05D32 466 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 PDE4BQ07343 736 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 CCL14Q16627 93 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 FAM47AQ5JRC9 791 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 FAM83BQ5T0W9 1011 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 WDR78Q5VTH9 848 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 PRPF38BQ5VTL8 546 aaKnown RBP21.08■□□□□ 0.97
LSM5-204ENST00000409909 UBE2Q1Q7Z7E8 422 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 CEP95Q96GE4 821 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 SPATC1LQ9H0A9 340 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 CWC22Q9HCG8 908 aaKnown RBP21.08■□□□□ 0.97
LSM5-204ENST00000409909 MTMR4Q9NYA4 1195 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 CLIP2Q9UDT6 1046 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 ADAMTS5Q9UNA0 930 aa21.08■□□□□ 0.97
LSM5-204ENST00000409909 SLC15A5A6NIM6 579 aa21.07■□□□□ 0.96
LSM5-204ENST00000409909 SLC3A2P08195 630 aaKnown RBP21.07■□□□□ 0.96
LSM5-204ENST00000409909 MAP2K5Q13163 448 aa21.07■□□□□ 0.96
LSM5-204ENST00000409909 ALX1Q15699 326 aa21.07■□□□□ 0.96
LSM5-204ENST00000409909 MAP3K21Q5TCX8 1036 aa21.07■□□□□ 0.96
LSM5-204ENST00000409909 SAMD1Q6SPF0 538 aaPredicted RBP21.07■□□□□ 0.96
LSM5-204ENST00000409909 ZNF589Q86UQ0 364 aaPredicted RBP21.07■□□□□ 0.96
LSM5-204ENST00000409909 MB21D1Q8N884 522 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms