RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 LDHBP07195 334 aaKnown RBP8.69□□□□□ -1.02
CXCR4-202ENST00000409817 CCDC192P0DO97 292 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 CALM1P0DP23 149 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 CALM2P0DP24 149 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 CALM3P0DP25 149 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 KLRK1P26718 216 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 TRIM29Q14134 588 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 NTRK3Q16288 839 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 MAP3K11Q16584 847 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 Q3C1V9 767 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 RBM43Q6ZSC3 357 aaKnown RBP8.69□□□□□ -1.02
CXCR4-202ENST00000409817 MICU3Q86XE3 530 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 TRIM22Q8IYM9 498 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 BICD2Q8TD16 824 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 KCNG4Q8TDN1 519 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 ZNF384Q8TF68 577 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 SDR42E1Q8WUS8 393 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 PDLIM2Q96JY6 352 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 TOMM22Q9NS69 142 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 MINDY4BA8MYZ0 360 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 DTNBO60941 627 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 FMNL1O95466 1100 aaPredicted RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 IL1R1P14778 569 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 PPP4CP60510 307 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 SSRP1Q08945 709 aaKnown RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 CHAF1AQ13111 956 aaPredicted RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 RTN1Q16799 776 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 RRP12Q5JTH9 1297 aaKnown RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 TBC1D22AQ8WUA7 517 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 NOL10Q9BSC4 688 aaKnown RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 ALG1Q9BT22 464 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 FUCA2Q9BTY2 467 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 A0A1W2PQ27 194 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 A0A1W2PQ64 194 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 A0A1W2PQD8 194 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 PRDX5P30044 214 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 CDC27P30260 824 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 DYNLL1P63167 89 aaKnown RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 KIF23Q02241 960 aaPredicted RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 PDE4BQ07343 736 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 SEC23AQ15436 765 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 CCDC178Q5BJE1 867 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 TXNRD3Q86VQ6 643 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 AMOTL1Q8IY63 956 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 PGBD1Q96JS3 809 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 USP28Q96RU2 1077 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 ZSCAN10Q96SZ4 725 aaPredicted RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 PPP1R12CQ9BZL4 782 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 TNMDQ9H2S6 317 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 CLSTN2Q9H4D0 955 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 DCP1AQ9NPI6 582 aaPredicted RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 RBM28Q9NW13 759 aaKnown RBP8.68□□□□□ -1.02
CXCR4-202ENST00000409817 DACT1Q9NYF0 836 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 TACC3Q9Y6A5 838 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 NRXN2Q9P2S2 1712 aa8.68□□□□□ -1.02
CXCR4-202ENST00000409817 RGPD3A6NKT7 1758 aaPredicted RBP8.67□□□□□ -1.02
CXCR4-202ENST00000409817 LAMB1P07942 1786 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 RGPD4Q7Z3J3 1758 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.67□□□□□ -1.02
CXCR4-202ENST00000409817 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 USP17L21D6R901 530 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 DDAH1O94760 285 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 TNKSO95271 1327 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 DEXIO95424 95 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 LIG1P18858 919 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 GPSM2P81274 684 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 DDR1Q08345 913 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 ADALQ6DHV7 355 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 CCDC73Q6ZRK6 1079 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 ZNF654Q8IZM8 581 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 FANCBQ8NB91 859 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
CXCR4-202ENST00000409817 RNF26Q9BY78 433 aaPredicted RBP8.67□□□□□ -1.02
CXCR4-202ENST00000409817 CD209Q9NNX6 404 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 AATFQ9NY61 560 aaKnown RBP eCLIP8.67□□□□□ -1.02
CXCR4-202ENST00000409817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
CXCR4-202ENST00000409817 SUGT1Q9Y2Z0 365 aa8.67□□□□□ -1.02
CXCR4-202ENST00000409817 ROBO3Q96MS0 1386 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 UFL1O94874 794 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 XBP1P17861 261 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 U2AF2P26368 475 aaKnown RBP eCLIP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 GUCY1B3Q02153 619 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 SAFBQ15424 915 aaKnown RBP eCLIP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 KRT40Q6A162 431 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 CATIPQ7Z7H3 387 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 LINC00301Q8NCQ3 95 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 ANKK1Q8NFD2 765 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 ZNF287Q9HBT7 754 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 SENP2Q9HC62 589 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms