RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 KRT26Q7Z3Y9 468 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
SHANK2-204ENST00000409530 ZBTB21Q9ULJ3 1066 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
SHANK2-204ENST00000409530 CDKL5O76039 1030 aa18.21■□□□□ 0.51
SHANK2-204ENST00000409530 CALM1P0DP23 149 aa18.21■□□□□ 0.51
SHANK2-204ENST00000409530 CALM2P0DP24 149 aa18.21■□□□□ 0.51
SHANK2-204ENST00000409530 CALM3P0DP25 149 aa18.21■□□□□ 0.51
SHANK2-204ENST00000409530 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
SHANK2-204ENST00000409530 ZC3H4Q9UPT8 1303 aaKnown RBP18.21■□□□□ 0.51
SHANK2-204ENST00000409530 SCN4AP35499 1836 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 SSC5DA1L4H1 1573 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 INPP5BP32019 993 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 ECE1P42892 770 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 NUCB2P80303 420 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 SSRP1Q08945 709 aaKnown RBP18.2■□□□□ 0.5
SHANK2-204ENST00000409530 NBR1Q14596 966 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 NTRK3Q16288 839 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 CCDC96Q2M329 555 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 NBPF11Q86T75 865 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 TAF1DQ9H5J8 278 aaPredicted RBP18.2■□□□□ 0.5
SHANK2-204ENST00000409530 CCDC196A0A1B0GTZ2 297 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 SPICE1Q8N0Z3 855 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 KANSL2Q9H9L4 492 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 GPCPD1Q9NPB8 672 aa18.2■□□□□ 0.5
SHANK2-204ENST00000409530 NID2Q14112 1375 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 IQCA1LA6NCM1 817 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 NT5C2P49902 561 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 MCTP1Q6DN14 999 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 TMTC3Q6ZXV5 915 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 MAD2L2Q9UI95 211 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 POTECB2RU33 542 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 PARP1P09874 1014 aaKnown RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 KIF5BP33176 963 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 CAP2P40123 477 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 GRM4Q14833 912 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 USP48Q86UV5 1035 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 SRBD1Q8N5C6 995 aaKnown RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 ANKS1AQ92625 1134 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 NUP88Q99567 741 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 ALG1Q9BT22 464 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 RRAGCQ9HB90 399 aa18.19■□□□□ 0.5
SHANK2-204ENST00000409530 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
SHANK2-204ENST00000409530 CNTNAP5Q8WYK1 1306 aa18.18■□□□□ 0.5
SHANK2-204ENST00000409530 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
SHANK2-204ENST00000409530 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
SHANK2-204ENST00000409530 HOMER1Q86YM7 354 aa18.18■□□□□ 0.5
SHANK2-204ENST00000409530 ACER1Q8TDN7 264 aa18.18■□□□□ 0.5
SHANK2-204ENST00000409530 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
SHANK2-204ENST00000409530 MTMR6Q9Y217 621 aa18.18■□□□□ 0.5
SHANK2-204ENST00000409530 WDR90Q96KV7 1748 aa18.18■□□□□ 0.5
SHANK2-204ENST00000409530 TBC1D12O60347 775 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 FMNL1O95466 1100 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-204ENST00000409530 BRD1O95696 1058 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-204ENST00000409530 PDHBP11177 359 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 IFNAR1P17181 557 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 PDCP20941 246 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 DCAF15Q66K64 600 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 C8orf76Q96K31 380 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 UBA5Q9GZZ9 404 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 KIF3AQ9Y496 699 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 DOCK1Q14185 1865 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 A0A1W2PRG0 241 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 PHF20L1A8MW92 1017 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 RCAN1P53805 252 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 DGKZQ13574 1117 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-204ENST00000409530 SIAH1Q8IUQ4 282 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 FEZ1Q99689 392 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
SHANK2-204ENST00000409530 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-204ENST00000409530 PITPNM2Q9BZ72 1349 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 KLRF2D3W0D1 207 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 SLC16A2P36021 539 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 ZNF341Q9BYN7 854 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 FMR1Q06787 632 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHANK2-204ENST00000409530 IKQ13123 557 aaPredicted RBP18.16■□□□□ 0.5
SHANK2-204ENST00000409530 TTLL12Q14166 644 aaPredicted RBP18.16■□□□□ 0.5
SHANK2-204ENST00000409530 ARHGEF10LQ9HCE6 1279 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 NMRK2Q9NPI5 230 aa18.16■□□□□ 0.5
SHANK2-204ENST00000409530 F13A1P00488 732 aa18.15■□□□□ 0.5
SHANK2-204ENST00000409530 ASNSP08243 561 aa18.15■□□□□ 0.5
SHANK2-204ENST00000409530 SLFN13Q68D06 897 aa18.15■□□□□ 0.5
SHANK2-204ENST00000409530 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
SHANK2-204ENST00000409530 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.5
SHANK2-204ENST00000409530 NYAP2Q9P242 653 aa18.15■□□□□ 0.5
SHANK2-204ENST00000409530 NCLP19338 710 aaKnown RBP18.14■□□□□ 0.5
SHANK2-204ENST00000409530 SLC1A4P43007 532 aa18.14■□□□□ 0.5
SHANK2-204ENST00000409530 NOVP48745 357 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms