RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CTNND1O60716 968 aaKnown RBP19.63■□□□□ 0.73
SSB-202ENST00000409333 ASNSP08243 561 aa19.63■□□□□ 0.73
SSB-202ENST00000409333 NTRK3Q16288 839 aa19.63■□□□□ 0.73
SSB-202ENST00000409333 PPP4R3BQ5MIZ7 849 aa19.63■□□□□ 0.73
SSB-202ENST00000409333 CDC37L1Q7L3B6 337 aa19.63■□□□□ 0.73
SSB-202ENST00000409333 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
SSB-202ENST00000409333 CMTR1Q8N1G2 835 aaKnown RBP19.63■□□□□ 0.73
SSB-202ENST00000409333 SMARCC2Q8TAQ2 1214 aa19.63■□□□□ 0.73
SSB-202ENST00000409333 TRPM7Q96QT4 1865 aa19.63■□□□□ 0.73
SSB-202ENST00000409333 CTCFLQ8NI51 663 aaPredicted RBP19.62■□□□□ 0.73
SSB-202ENST00000409333 MKL1Q969V6 931 aa19.62■□□□□ 0.73
SSB-202ENST00000409333 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
SSB-202ENST00000409333 DDX11Q96FC9 970 aa19.62■□□□□ 0.73
SSB-202ENST00000409333 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
SSB-202ENST00000409333 GRM4Q14833 912 aa19.62■□□□□ 0.73
SSB-202ENST00000409333 ZKSCAN4Q969J2 545 aaPredicted RBP19.62■□□□□ 0.73
SSB-202ENST00000409333 A0A1W2PRG0 241 aa19.61■□□□□ 0.73
SSB-202ENST00000409333 USP2O75604 605 aaPredicted RBP19.61■□□□□ 0.73
SSB-202ENST00000409333 PLEKHA8P1O95397 391 aa19.61■□□□□ 0.73
SSB-202ENST00000409333 ECE1P42892 770 aa19.61■□□□□ 0.73
SSB-202ENST00000409333 STAG2Q8N3U4 1231 aa19.61■□□□□ 0.73
SSB-202ENST00000409333 PHKBQ93100 1093 aa19.61■□□□□ 0.73
SSB-202ENST00000409333 RBM28Q9NW13 759 aaKnown RBP19.61■□□□□ 0.73
SSB-202ENST00000409333 MAD2L2Q9UI95 211 aa19.61■□□□□ 0.73
SSB-202ENST00000409333 CCDC196A0A1B0GTZ2 297 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 PDHBP11177 359 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 PPP2R5BQ15173 497 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 LDHDQ86WU2 507 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 CCDC82Q8N4S0 544 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.738e-11■■■■□ 25.5
SSB-202ENST00000409333 ACER1Q8TDN7 264 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 MAP3K14Q99558 947 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 TRAF5O00463 557 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 GOLGA8HP0CJ92 632 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 FDPSP14324 419 aaKnown RBP19.6■□□□□ 0.73
SSB-202ENST00000409333 FMR1Q06787 632 aaKnown RBP eCLIP19.6■□□□□ 0.73
SSB-202ENST00000409333 USP17L2Q6R6M4 530 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 TMTC3Q6ZXV5 915 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 SCYL3Q8IZE3 742 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 ARHGEF10LQ9HCE6 1279 aa19.6■□□□□ 0.73
SSB-202ENST00000409333 SNHG28P0DPA3 235 aa19.59■□□□□ 0.73
SSB-202ENST00000409333 IFNAR1P17181 557 aa19.59■□□□□ 0.73
SSB-202ENST00000409333 KIF5BP33176 963 aa19.59■□□□□ 0.73
SSB-202ENST00000409333 PKP1Q13835 747 aa19.59■□□□□ 0.73
SSB-202ENST00000409333 CPLX2Q6PUV4 134 aaKnown RBP19.59■□□□□ 0.73
SSB-202ENST00000409333 GINM1Q9NU53 330 aa19.59■□□□□ 0.73
SSB-202ENST00000409333 PARP14Q460N5 1801 aa19.58■□□□□ 0.73
SSB-202ENST00000409333 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.73
SSB-202ENST00000409333 RAD21O60216 631 aa19.58■□□□□ 0.73
SSB-202ENST00000409333 PPP1R12BO60237 982 aaPredicted RBP19.58■□□□□ 0.73
SSB-202ENST00000409333 CDKL5O76039 1030 aa19.58■□□□□ 0.73
SSB-202ENST00000409333 PARP1P09874 1014 aaKnown RBP19.58■□□□□ 0.73
SSB-202ENST00000409333 NF2P35240 595 aa19.58■□□□□ 0.73
SSB-202ENST00000409333 HMGN5P82970 282 aaKnown RBP19.58■□□□□ 0.73
SSB-202ENST00000409333 NBPF11Q86T75 865 aa19.58■□□□□ 0.73
SSB-202ENST00000409333 MYH15Q9Y2K3 1946 aa19.58■□□□□ 0.72
SSB-202ENST00000409333 FRMPD2Q68DX3 1309 aaPredicted RBP19.57■□□□□ 0.72
SSB-202ENST00000409333 CNTNAP5Q8WYK1 1306 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 UBE2Q2LH0YL09 131 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 FUT2Q10981 343 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.57■□□□□ 0.72
SSB-202ENST00000409333 MOB2Q70IA6 237 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 SRBD1Q8N5C6 995 aaKnown RBP19.57■□□□□ 0.72
SSB-202ENST00000409333 SLC26A6Q9BXS9 759 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 TMX2Q9Y320 296 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 F5H6K3 240 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 KLRC3Q07444 240 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 VGLL4Q14135 290 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
SSB-202ENST00000409333 SLFN13Q68D06 897 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 GMCL1P1Q8NEA9 526 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 CPVLQ9H3G5 476 aa19.57■□□□□ 0.72
SSB-202ENST00000409333 ORC3Q9UBD5 711 aaPredicted RBP19.57■□□□□ 0.72
SSB-202ENST00000409333 CIZ1Q9ULV3 898 aaPredicted RBP19.57■□□□□ 0.72
SSB-202ENST00000409333 STK36Q9NRP7 1315 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 FMNL1O95466 1100 aaPredicted RBP19.56■□□□□ 0.72
SSB-202ENST00000409333 NDUFB10O96000 172 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 PTPRAP18433 802 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 SSRP1Q08945 709 aaKnown RBP19.56■□□□□ 0.72
SSB-202ENST00000409333 ZYXQ15942 572 aaKnown RBP19.56■□□□□ 0.72
SSB-202ENST00000409333 KIAA1755Q5JYT7 1200 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 FAM184AQ8NB25 1140 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 PICK1Q9NRD5 415 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 CHMP5Q9NZZ3 219 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 SYNPO2Q9UMS6 1093 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 TCHHQ07283 1943 aa19.56■□□□□ 0.72
SSB-202ENST00000409333 SYT1P21579 422 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 IREB2P48200 963 aaKnown RBP19.55■□□□□ 0.72
SSB-202ENST00000409333 MAP3K9P80192 1104 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 ZNF543Q08ER8 600 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 TTLL12Q14166 644 aaPredicted RBP19.55■□□□□ 0.72
SSB-202ENST00000409333 SLC35G1Q2M3R5 365 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 ASPRV1Q53RT3 343 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 KCTD1Q719H9 257 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 ZNF408Q9H9D4 720 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 SNCAIPQ9Y6H5 919 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 hCG_1642624A0A1W2PR95 340 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 KLRF2D3W0D1 207 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 FOSBP53539 338 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms