RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 BMP3P12645 472 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 ADORA1P30542 326 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 LIG4P49917 911 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 UBXN2AP68543 259 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 UBE3CQ15386 1083 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SYDE2Q5VT97 1194 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 PODNQ7Z5L7 613 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SP8Q8IXZ3 490 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 AMNQ9BXJ7 453 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 NT5C3AQ9H0P0 336 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GRPEL1Q9HAV7 217 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 PALD1Q9ULE6 856 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GOLGA6L9A6NEM1 432 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 KLRF2D3W0D1 207 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CYP27B1O15528 508 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ABL1P00519 1130 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 UBXN1Q04323 297 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 USP17L2Q6R6M4 530 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CABP7Q86V35 215 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SLC16A10Q8TF71 515 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 IWS1Q96ST2 819 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 LLPHQ9BRT6 129 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 RASAL2Q9UJF2 1139 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 MED23Q9ULK4 1368 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 E7EWF7 191 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CAVIN2O95810 425 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 FOSP01100 380 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 GABPAQ06546 454 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SLC15A2Q16348 729 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 GPATCH4Q5T3I0 446 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 KCTD1Q719H9 257 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ZNF654Q8IZM8 581 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 TMX1Q9H3N1 280 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 HOXC10Q9NYD6 342 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 RABGAP1Q9Y3P9 1069 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 PCDHA1Q9Y5I3 950 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ZHX2Q9Y6X8 837 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ZMYM4Q5VZL5 1548 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ARHGEF40Q8TER5 1519 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 FSD2A1L4K1 749 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 USP17L5A8MUK1 530 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CYP19A1P11511 503 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 GPSM2P81274 684 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CFAP58Q5T655 872 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ZBTB33Q86T24 672 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SELENOOQ9BVL4 669 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 APOL6Q9BWW8 343 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 GBP3Q9H0R5 595 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ZFYVE28Q9HCC9 887 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 PARP2Q9UGN5 583 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SEPT9Q9UHD8 586 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 DDX25Q9UHL0 483 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CTNND2Q9UQB3 1225 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CDK12Q9NYV4 1490 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 NEMFO60524 1076 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 UBASH3AP57075 661 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 DYNLL1P63167 89 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SREBF2Q12772 1141 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CCDC14Q49A88 953 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ATL3Q6DD88 541 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 FASTKD5Q7L8L6 764 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 PNMA8AQ86V59 439 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 METTL23Q86XA0 190 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 MICALL2Q8IY33 904 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 DIS3L2Q8IYB7 885 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SERPINB13Q9UIV8 391 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 XPOTO43592 962 aaKnown RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 EXOC3O60645 756 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 DMP1Q13316 513 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-203ENST00000409101 HLFQ16534 295 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 GALNT17Q6IS24 598 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 KIAA1841Q6NSI8 718 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 NLRP7Q8WX94 980 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 OTUD5Q96G74 571 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 CDHR1Q96JP9 859 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 TBC1D2Q9BYX2 928 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 AXIN2Q9Y2T1 843 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ELP1O95163 1332 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 SSH2Q76I76 1423 aa5.6□□□□□ -1.51
SCN3A-203ENST00000409101 ZBBXA8MT70 800 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 GNAT1P11488 350 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 TNNI1P19237 187 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 PLCB3Q01970 1234 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 SKIV2LQ15477 1246 aaKnown RBP5.59□□□□□ -1.51
SCN3A-203ENST00000409101 RC3H1Q5TC82 1133 aaKnown RBP5.59□□□□□ -1.51
SCN3A-203ENST00000409101 JADE2Q9NQC1 790 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 ZNRF3Q9ULT6 936 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 AGTPBP1Q9UPW5 1226 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 IQGAP3Q86VI3 1631 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 STK25O00506 426 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 TLR3O15455 904 aaKnown RBP5.59□□□□□ -1.51
SCN3A-203ENST00000409101 STK10O94804 968 aaKnown RBP5.59□□□□□ -1.51
SCN3A-203ENST00000409101 NFIXQ14938 502 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 MAP9Q49MG5 647 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 ATP6V0A1Q93050 837 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 LBHD1Q9BQE6 289 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-203ENST00000409101 TSPYL1Q9H0U9 437 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 GOLGA6L7A0A1B0GV03 622 aa5.59□□□□□ -1.51
SCN3A-203ENST00000409101 hCG_1642624A0A1W2PR95 340 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms