RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 HOXC6P09630 235 aa15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 FDX1P10109 184 aa15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 CDK8P49336 464 aa15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 NT5C2P49902 561 aa15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 MFAP1P55081 439 aaKnown RBP15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 RRP1P56182 461 aaKnown RBP15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 FSD1Q9BTV5 496 aa15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 DDX60LQ5H9U9 1706 aaKnown RBP15.34■□□□□ 0.05
SNORD88B-201ENST00000408454 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
SNORD88B-201ENST00000408454 MX1P20591 662 aa15.34■□□□□ 0.05
SNORD88B-201ENST00000408454 PTPREP23469 700 aa15.34■□□□□ 0.05
SNORD88B-201ENST00000408454 SPDYE16A6NNV3 312 aaPredicted RBP15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 FCER1AP12319 257 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 HABP4Q5JVS0 413 aaKnown RBP15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 MORN1Q5T089 497 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 SHISA4Q96DD7 197 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 STRBPQ96SI9 672 aaKnown RBP15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 NAPBQ9H115 298 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 NRBP1Q9UHY1 535 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
SNORD88B-201ENST00000408454 MYO5AQ9Y4I1 1855 aaKnown RBP15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 GPAA1O43292 621 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 GRB14Q14449 540 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 KCTD2Q14681 263 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 MAP3K21Q5TCX8 1036 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 ARRDC4Q8NCT1 418 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 TRIB2Q92519 343 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 RWDD1Q9H446 243 aaPredicted RBP15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 C11orf49Q9H6J7 331 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 TXNRD2Q9NNW7 524 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 NYAP2Q9P242 653 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 OGDHLQ9ULD0 1010 aa15.32■□□□□ 0.04
SNORD88B-201ENST00000408454 ZSWIM8A7E2V4 1837 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 MYH7P12883 1935 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 MINDY4BA8MYZ0 360 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 RAD21O60216 631 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 DSG3P32926 999 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 JAG1P78504 1218 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 PLS1Q14651 629 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 CTR9Q6PD62 1173 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
SNORD88B-201ENST00000408454 H0YGN5 161 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 TSPY3P0CV98 308 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 TSPY8P0CW00 308 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 MYH8P13535 1937 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 NCAPG2Q86XI2 1143 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 USP6NLQ92738 828 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 PORCNQ9H237 461 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 PRKAG2Q9UGJ0 569 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 PNMA2Q9UL42 364 aa15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 DIS3Q9Y2L1 958 aaKnown RBP15.3■□□□□ 0.04
SNORD88B-201ENST00000408454 PRKAB2O43741 272 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 ZBED4O75132 1171 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 TTLL1O95922 423 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 PCP11498 1178 aaKnown RBP15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 EEF2P13639 858 aaKnown RBP15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 AKR1B1P15121 316 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 PRPF38AQ8NAV1 312 aaKnown RBP15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 PAWRQ96IZ0 340 aaKnown RBP15.29■□□□□ 0.04
SNORD88B-201ENST00000408454 KBTBD13C9JR72 458 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 HIP1O00291 1037 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 CNGA1P29973 690 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 CACNB2Q08289 660 aaPredicted RBP15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 Q3C1V9 767 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 SLF1Q9BQI6 1058 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 MOV10L1Q9BXT6 1211 aaKnown RBP15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 TEX13BQ9BXU2 312 aa15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 DDX20Q9UHI6 824 aaKnown RBP15.28■□□□□ 0.04
SNORD88B-201ENST00000408454 ZNF236Q9UL36 1845 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 A0A1W2PRG0 241 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 CYP2D6P10635 497 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 ERCC3P19447 782 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 ADORA2AP29274 412 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 OAZ1P54368 228 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 RIOX2Q8IUF8 465 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 CHURC1Q8WUH1 139 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 MMP19Q99542 508 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 HELLSQ9NRZ9 838 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 BTBD7Q9P203 1132 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 FEM1BQ9UK73 627 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 PPP1R9AQ9ULJ8 1098 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 CNPY2Q9Y2B0 182 aa15.27■□□□□ 0.04
SNORD88B-201ENST00000408454 DNM1LO00429 736 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms