RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 RWDD2BP57060 319 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 ZNF827Q17R98 1081 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 SYNRGQ9UMZ2 1314 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 MYH8P13535 1937 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 ECM2O94769 699 aaPredicted RBP25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 CUL4BQ13620 913 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 CDCA2Q69YH5 1023 aaPredicted RBP25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 CHST3Q7LGC8 479 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 CAPZA3Q96KX2 299 aa25.03■■□□□ 1.6
CUEDC1-202ENST00000407144 LRRC10BA6NIK2 292 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 GOLGA8BA8MQT2 603 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 GCKP35557 465 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 XRCC4Q13426 336 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 TTLL7Q6ZT98 887 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 CD302Q8IX05 232 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 LINS1Q8NG48 757 aa25.02■■□□□ 1.6
CUEDC1-202ENST00000407144 KLF18A0A0U1RQI7 1052 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 TSEN2Q8NCE0 465 aaKnown RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 P3H4Q92791 437 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 DBF4Q9UBU7 674 aaPredicted RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 SERTAD1Q9UHV2 236 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 PDE2AO00408 941 aaPredicted RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 MGRN1O60291 552 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 CHGBP05060 677 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 HSPD1P10809 573 aaKnown RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 MDH1P40925 334 aaKnown RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 LACTB2Q53H82 288 aaPredicted RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 TNNI3KQ59H18 835 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 PPP4R3AQ6IN85 833 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 FNBP4Q8N3X1 1017 aaPredicted RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 CCDC26Q8TAB7 109 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 ITFG2Q969R8 447 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 TRIM10Q9UDY6 481 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 LIMA1Q9UHB6 759 aaKnown RBP25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 FPGT-TNNI3KV9GXZ4 949 aa25.01■■□□□ 1.59
CUEDC1-202ENST00000407144 ATP1A2P50993 1020 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 HDLBPQ00341 1268 aaKnown RBP25■■□□□ 1.59
CUEDC1-202ENST00000407144 C4AP0C0L4 1744 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 C4BP0C0L5 1744 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 PRR36Q9H6K5 1346 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 KDM3BQ7LBC6 1761 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 CCDC122Q5T0U0 273 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 ZNF579Q8NAF0 562 aaKnown RBP25■■□□□ 1.59
CUEDC1-202ENST00000407144 SCLT1Q96NL6 688 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 ZIM3Q96PE6 472 aa25■■□□□ 1.59
CUEDC1-202ENST00000407144 NUP88Q99567 741 aaPredicted RBP25■■□□□ 1.59
CUEDC1-202ENST00000407144 KRT9P35527 623 aa24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 KRT83P78385 493 aa24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 SLMAPQ14BN4 828 aa24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 ZMYM1Q5SVZ6 1142 aa24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 KRT40Q6A162 431 aa24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 CALR3Q96L12 384 aaKnown RBP24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 ALG1Q9BT22 464 aa24.99■■□□□ 1.59
CUEDC1-202ENST00000407144 POLR2DO15514 142 aaKnown RBP24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 KRT86O43790 486 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 NR1D1P20393 614 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 GUCY1A3Q02108 690 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 C2orf54Q08AI8 447 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 WDR19Q8NEZ3 1342 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 DDX60Q8IY21 1712 aaKnown RBP24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 USP6P35125 1406 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 CWF19L2Q2TBE0 894 aaKnown RBP24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 GLE1Q53GS7 698 aaKnown RBP24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 ANKRD20A8PQ5CZ79 823 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 SPECC1Q5M775 1068 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 FAM43BQ6ZT52 329 aaPredicted RBP24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 IQCKQ8N0W5 287 aa24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 IQSEC3Q9UPP2 1182 aaPredicted RBP24.98■■□□□ 1.59
CUEDC1-202ENST00000407144 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 ACTN4O43707 911 aaKnown RBP24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 PTPREP23469 700 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 RBBP5Q15291 538 aaKnown RBP24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 SH2D3CQ8N5H7 860 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 RASSF8Q8NHQ8 419 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 TCP11Q8WWU5 503 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 CNKSR2Q8WXI2 1034 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 AIDAQ96BJ3 306 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 SAAL1Q96ER3 474 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 FAM210AQ96ND0 272 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 EBF2Q9HAK2 575 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 COPRSQ9NQ92 184 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 ANKRD18BA2A2Z9 1011 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 SH2B2O14492 632 aaPredicted RBP24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 HERVK_113P62684 666 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 SPAG1Q07617 926 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 E2F5Q15329 346 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 CYFIP2Q96F07 1278 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 CHP1Q99653 195 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 GPHNQ9NQX3 736 aaPredicted RBP24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 MST1RQ04912 1400 aa24.97■■□□□ 1.59
CUEDC1-202ENST00000407144 FRMD3A2A2Y4 597 aa24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 RNF225M0QZC1 329 aaPredicted RBP24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 DNAJC8O75937 253 aaPredicted RBP24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 CDKL5O76039 1030 aa24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 CRELD2Q6UXH1 353 aaPredicted RBP24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 DDX46Q7L014 1031 aaKnown RBP24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 HAUS2Q9NVX0 235 aa24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 DMGDHQ9UI17 866 aaKnown RBP24.96■■□□□ 1.59
CUEDC1-202ENST00000407144 A0A0G2JLW4 131 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms